Evidence map›Paper›PMID 22696596›Full record

ArticleCarcinogenesis2012

Exome sequencing identifies MXRA5 as a novel cancer gene frequently mutated in non-small cell lung carcinoma from Chinese patients.

Donghai Xiong, Guangming Li, Kezhen Li, Qinzi Xu, Zhongjie Pan, Feng Ding, Peter Vedell, Pengyuan Liu, Peng Cui, Xing Hua and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in Carcinogenesis, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 68 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 6 institutions in 2 countries.

Donghai XiongDepartment of Pharmacology and Toxicology and Cancer Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA.
Guangming Li
Kezhen Li
Qinzi Xu
Zhongjie Pan
Feng Ding
Peter Vedell
Pengyuan Liu
Peng Cui
Xing Hua
Hui Jiang
Yuxin Yin
Ze Zhu
Xiaomian Li
Bin Zhang
Ding Ma
Yian Wang
Ming You
Medical College of Wisconsin · USTianjin Medical University · CNCancer Research Center · USWashington University in St. Louis · USTongji Hospital · CNUnion Hospital · CN

Funding

Genome-Wide Association Studies of Inherited Predisposition to Lung CancerR01CA134682 · NCI · WASHINGTON UNIVERSITY · PI LIU, PENGYUAN, YOU, MING · 2009 to 2013
$2.2M
Chemoprevention of lung cancer with red ginseng extractsR01AT005522 · NCCIH · WASHINGTON UNIVERSITY · PI YOU, MING · 2009 to 2012
$1.9M
MOLECULAR GENETICS OF LUNG TUMOR PROMOTION IN MICER01CA134433 · NCI · WASHINGTON UNIVERSITY · PI LIU, PENGYUAN, VIKIS, HARIS G. · 2009 to 2013
$1.5M
Chemoprevention of Lung Cancer with Anti-tumor BR01AT003203 · NCCIH · WASHINGTON UNIVERSITY · PI YOU, MING · 2007 to 2010
$1.5M
Chemoprevention with mTOR & Farnesyltransferase InhibitorsR01CA113793 · NCI · WASHINGTON UNIVERSITY · PI YOU, MING · 2006 to 2010
$1.3M
Molecular Characterization of Stage I Lung CancerR01CA129533 · NCI · WASHINGTON UNIVERSITY · PI YOU, MING · 2008 to 2010
$996k
NCCIH NIH HHS 7R01AT003203NCCIH NIH HHS 7R01AT005522NCCIH NIH HHS R01 AT003203NCCIH NIH HHS R01 AT005522NCI NIH HHS 5R01CA113793NCI NIH HHS 5R01CA129533NCI NIH HHS 5R01CA134433NCI NIH HHS 5R01CA134682NCI NIH HHS R01 CA113793NCI NIH HHS R01 CA129533NCI NIH HHS R01 CA134433NCI NIH HHS R01 CA134682
6 · The paper itself

Abstract

Lung cancer has become the top killer among malignant tumors in China and is significantly associated with somatic genetic alterations. We performed exome sequencing of 14 non-small cell lung carcinomas (NSCLCs) with matched adjacent normal lung tissues extracted from Chinese patients. In addition to the lung cancer-related genes (TP53, EGFR, KRAS, PIK3CA, and ROS1), this study revealed "novel" genes not previously implicated in NSCLC. Especially, matrix-remodeling associated 5 was the second most frequently mutated gene in NSCLC (first is TP53). Subsequent Sanger sequencing of matrix-remodeling associated 5 in an additional sample set consisting of 52 paired tumor-normal DNA samples revealed that 15% of Chinese NSCLCs contained somatic mutations in matrix-remodeling associated 5. These findings, together with the results from pathway analysis, strongly indicate that altered extracellular matrix-remodeling may be involved in the etiology of NSCLC.

Indexed as

ExomeGenes, NeoplasmMutationAntigens, NuclearAsian PeopleCarcinoma, Non-Small-Cell LungCell Cycle ProteinsCohesinsHumansLung NeoplasmsProteoglycansAntigens, NuclearCell Cycle ProteinsCohesinsMXRA5 protein, humanProteoglycansSTAG2 protein, human

Identifiers

PMID22696596
PMCPMC3514907
OpenAlexW2127094227

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.