Evidence map›Paper›PMID 22694930›Full record

ArticleThe Journal of allergy and clinical immunology2012

Genome-wide association studies of asthma indicate opposite immunopathogenesis direction from autoimmune diseases.

Xingnan Li, Elizabeth J Ampleford, Timothy D Howard, Wendy C Moore, Dara G Torgerson, Huashi Li, William W Busse, Mario Castro, Serpil C Erzurum, Elliot Israel and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of allergy and clinical immunology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed, 3 pooled it
7.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed, 3 syntheses or guidelines pooled it, 143 citations in OpenAlex.

  1. Pooled it
  2. Transethnic meta-analysis identifiesAnnals of the rheumatic diseases · 2017
    Pooled it
  3. Pooled it
  4. Article
  5. Review
  6. Bidirectional risk of autoimmune disease and eosinophilic esophagitis in Sweden.Esophagus : official journal of the Japan Esophageal Society · 2026
    Article
  7. Genome-wide Association Study IdentifiesAllergy, asthma & immunology research · 2026
    Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Review
  13. Review
  14. Article
  15. Investigations of a combination of atopic status and age of asthma onset identify asthma subphenotypes.The Journal of asthma : official journal of the Association for the Care of Asthma · 2023
    Article
  16. Genetic analyses of chr11p15.5 region identifyThe Journal of asthma : official journal of the Association for the Care of Asthma · 2023
    Article
  17. Article
  18. Review
  19. Review
  20. New Insights Relating Gasdermin B to the Onset of Childhood Asthma.American journal of respiratory cell and molecular biology · 2022
    Review

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 8 institutions in 2 countries.

Xingnan LiCenter for Genomics and Personalized Medicine Research, Wake Forest University School of Medicine, Winston-Salem, NC 27157, USA. xinli@wfubmc.edu
Elizabeth J Ampleford
Timothy D Howard
Wendy C Moore
Dara G Torgerson
Huashi Li
William W Busse
Mario Castro
Serpil C Erzurum
Elliot Israel
Dan L Nicolae
Carole Ober
Sally E Wenzel
Gregory A Hawkins
Eugene R Bleecker
Deborah A Meyers
Wake Forest University · USUniversity of Chicago · USCleveland Clinic Lerner College of Medicine · USHarvard University · USInstitute of Human Genetics · PLUniversity of Pittsburgh · USUniversity of Wisconsin–Madison · USWashington University in St. Louis · US

Funding

UNIVERSITY OF PITTSBURGH CLINICAL AND TRANSLATIONAL SCIENCE INSTITUTE: BPCAUL1RR024153 · NCRR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI REIS, STEVEN E · 2006 to 2011
$73.9M
University of Pittsburgh Clinical and Translational Science InstituteUL1TR000005 · NCATS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI REIS, STEVEN E · 2012 to 2015
$50.8M
Washington University Institute of Clinical and Translational Sciences (UL1)UL1RR024992 · NCRR · WASHINGTON UNIVERSITY · PI EVANOFF, BRADLEY A · 2007 to 2011
$45.4M
Washington University Institute of Clinical and Translational SciencesUL1TR000448 · NCATS · WASHINGTON UNIVERSITY · PI EVANOFF, BRADLEY A · 2012 to 2016
$41.4M
WORKER PROTECTION AGAINST AIRBORNE INFLUENZA - A PILOT STUDYM01RR007122 · NCRR · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI HOLMES, ROSS P · 1992 to 2010
$35.2M
ZOSUQUIDAR TRIHYDROCHLORIDE IN NEWLY DIAGNOSED AMLM01RR003186 · NCRR · UNIVERSITY OF WISCONSIN-MADISON · PI MATLOUB, YOUSIF H · 1986 to 2007
$19.3M
VIRALLY-INDUCED STAT-1, STAT-3 AND STAT-6M01RR018390 · NCRR · CLEVELAND CLINIC LERNER COM-CWRU · PI GILDEA, THOMAS · 2003 to 2007
$11.0M
Severe Asthma Research ProjectR01HL069174 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI WENZEL, SALLY E · 2001 to 2010
$9.2M
Genome Wide Association for Asthma and Lung FunctionR01HL087665 · NHLBI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI MEYERS, DEBORAH A. · 2007 to 2009
$7.7M
Severe Asthma From Respiratory InfectionsR01HL069116 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI BUSSE, WILLIAM W. · 2001 to 2010
$7.6M
The EVE Asthma Genetics Consortium: Building Upon GWASRC2HL101651 · NHLBI · UNIVERSITY OF CHICAGO · PI NICOLAE, DAN LIVIU, OBER, CAROLE · 2009 to 2010
$7.4M
Genotype-Phenotype Interactions in Severe AsthmaR01HL069167 · NHLBI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI BLEECKER, EUGENE ROLAND · 2001 to 2010
$5.5M
NCATS NIH HHS UL1 TR000005NCATS NIH HHS UL1 TR000448NCRR NIH HHS M01 RR003186NCRR NIH HHS M01 RR007122NCRR NIH HHS M01 RR018390NCRR NIH HHS M01RR018390NCRR NIH HHS M01RR03186NCRR NIH HHS M01RR07122NCRR NIH HHS UL1 RR024153NCRR NIH HHS UL1 RR024992NCRR NIH HHS UL1RR024992NHLBI NIH HHS HL101651NHLBI NIH HHS HL69116NHLBI NIH HHS HL69130NHLBI NIH HHS HL69149NHLBI NIH HHS HL69155NHLBI NIH HHS HL69167NHLBI NIH HHS HL69170NHLBI NIH HHS HL69174NHLBI NIH HHS HL69349NHLBI NIH HHS HL72414NHLBI NIH HHS HL76285NHLBI NIH HHS HL87665NHLBI NIH HHS HL91762NHLBI NIH HHS R01 HL069116NHLBI NIH HHS R01 HL069130NHLBI NIH HHS R01 HL069149NHLBI NIH HHS R01 HL069155NHLBI NIH HHS R01 HL069167NHLBI NIH HHS R01 HL069170NHLBI NIH HHS R01 HL069174NHLBI NIH HHS R01 HL069349NHLBI NIH HHS R01 HL072414NHLBI NIH HHS R01 HL076285NHLBI NIH HHS R01 HL087665NHLBI NIH HHS R01 HL091762NHLBI NIH HHS RC2 HL101651NHLBI NIH HHS U10 HL109164
6 · The paper itself

Abstract

backgroundGenome-wide association studies (GWASs) of asthma have consistently implicated the ORM1-like 3 and gasdermin B (ORMDL3-GSDMB), IL33, IL-1 receptor-like 1 and IL-18 receptor 1 (IL1RL1-IL18R1), RAD50-IL13, thymic stromal lymphopoietin and WD repeat domain 36 region (TSLP-WDR36), and HLA-DR/DQ regions.

objectiveA GWAS of asthma was performed in a non-Hispanic white population.

methodsA GWAS was performed in 813 Severe Asthma Research Program/Collaborative Studies on the Genetics of Asthma/Chicago Asthma Genetics Study cases and 1564 control subjects. The GWAS results were compared with those of the published GWASs of autoimmune diseases.

resultsMultiple single nucleotide polymorphisms in the TNFAIP3 interacting protein 1 (TNIP1) gene, which interacts with TNFAIP3 and inhibits the TNF-α-induced nuclear factor κB inflammation pathway, were associated with asthma: rs1422673 (P = 3.44 × 10(-7)) and rs10036748 (P = 1.41 × 10(-6), r(2) = 0.67). rs1422673 was also associated with asthma in the published GABRIEL (P = .018) and EVE (P = 1.31 × 10(-5)) studies. The minor allele T of rs20541 in IL13 is the risk allele for asthma but the protective allele for psoriasis. The minor allele T of rs2395185 in HLA-DRA is the risk allele for asthma but the protective allele for ulcerative colitis. The minor allele A of rs2872507 in GSDMB is the protective allele for asthma but the risk allele for rheumatoid arthritis, Crohn disease, and ulcerative colitis. The T allele of rs10036748 in the TNIP1 gene is the minor protective allele for asthma but the minor or major risk allele for systemic lupus erythematosus and systemic sclerosis in non-Hispanic white or Chinese subjects, respectively.

conclusionsOur study suggests that single nucleotide polymorphisms associated with both asthma and autoimmune diseases might have opposite effects on immunopathogenesis.

Indexed as

Genome-Wide Association StudyPolymorphism, Single NucleotideAsthmaAutoimmune DiseasesDNA-Binding ProteinsHumansDNA-Binding ProteinsTNIP1 protein, human

Identifiers

PMID22694930
PMCPMC3579216
OpenAlexW1993136355

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.