Evidence map›Paper›PMID 22692207›Full record

ArticleThe Journal of biological chemistry2012

Metabolism of vertebrate amino sugars with N-glycolyl groups: resistance of α2-8-linked N-glycolylneuraminic acid to enzymatic cleavage.

Leela R L Davies, Oliver M T Pearce, Matthew B Tessier, Siavash Assar, Victoria Smutova, Maria Pajunen, Mizuki Sumida, Chihiro Sato, Ken Kitajima, Jukka Finne and 4 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 54 citations in OpenAlex.

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  13. Control of Innate Immunity by Sialic Acids in the Nervous Tissue.International journal of molecular sciences · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 5 countries.

Leela R L DaviesDepartment of Medicine, Glycobiology Research and Training Center, University of California San Diego, La Jolla, California 92093-0687, USA.
Oliver M T Pearce
Matthew B Tessier
Siavash Assar
Victoria Smutova
Maria Pajunen
Mizuki Sumida
Chihiro Sato
Ken Kitajima
Jukka Finne
Pascal Gagneux
Alexey Pshezhetsky
Robert Woods
Ajit Varki
University of California, San Diego · USNagoya University · JPUniversité de Montréal · CAUniversity of Georgia · USUniversity of Helsinki · FI

Funding

TR&D3. Approaches to Proteoglycan Function at Biochemical and Cellular LevelsP41GM103390 · NIGMS · UNIVERSITY OF GEORGIA · PI MOREMEN, KELLEY W. · 2012 to 2019
$14.5M
BIOSYNTHESIS AND REGULATION OF SUBSTITUTED SIALIC ACIDSR01GM032373 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI VARKI, AJIT P · 1985 to 2022
$6.9M
SULFATED OLIGOSACCHARIDES OF NORMAL AND MALIGNANT CELLSR01CA038701 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI VARKI, AJIT P · 1985 to 2015
$5.5M
Integrating Experiment and Theory to Characterize Diagnostic Antibody SpecificityR01GM094919 · NIGMS · UNIVERSITY OF GEORGIA · PI WOODS, ROBERT J · 2010 to 2013
$1.7M
Glycan Diversity and Anti-Glycan Antibodies as Barriers to Gene FlowR01GM095882 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GAGNEUX, PASCAL · 2011 to 2015
$1.4M
NCI NIH HHS R01 CA038701NCI NIH HHS R01CA38701NIGMS NIH HHS GM094919NIGMS NIH HHS P41 GM103390NIGMS NIH HHS R01 GM032373NIGMS NIH HHS R01 GM094919NIGMS NIH HHS R01 GM095882NIGMS NIH HHS R01GM32373
6 · The paper itself

Abstract

The sialic acid (Sia) N-acetylneuraminic acid (Neu5Ac) and its hydroxylated derivative N-glycolylneuraminic acid (Neu5Gc) differ by one oxygen atom. CMP-Neu5Gc is synthesized from CMP-Neu5Ac, with Neu5Gc representing a highly variable fraction of total Sias in various tissues and among different species. The exception may be the brain, where Neu5Ac is abundant and Neu5Gc is reported to be rare. Here, we confirm this unusual pattern and its evolutionary conservation in additional samples from various species, concluding that brain Neu5Gc expression has been maintained at extremely low levels over hundreds of millions of years of vertebrate evolution. Most explanations for this pattern do not require maintaining neural Neu5Gc at such low levels. We hypothesized that resistance of α2-8-linked Neu5Gc to vertebrate sialidases is the detrimental effect requiring the relative absence of Neu5Gc from brain. This linkage is prominent in polysialic acid (polySia), a molecule with critical roles in vertebrate neural development. We show that Neu5Gc is incorporated into neural polySia and does not cause in vitro toxicity. Synthetic polymers of Neu5Ac and Neu5Gc showed that mammalian and bacterial sialidases are much less able to hydrolyze α2-8-linked Neu5Gc at the nonreducing terminus. Notably, this difference was not seen with acid-catalyzed hydrolysis of polySias. Molecular dynamics modeling indicates that differences in the three-dimensional conformation of terminal saccharides may partly explain reduced enzymatic activity. In keeping with this, polymers of N-propionylneuraminic acid are sensitive to sialidases. Resistance of Neu5Gc-containing polySia to sialidases provides a potential explanation for the rarity of Neu5Gc in the vertebrate brain.

Indexed as

Amino SugarsAnimalsBacteriaBrainBrain ChemistryCarbohydrate ConformationCattleDolphinsElephantsEvolution, MolecularHydrolysisMiceN-Acetylneuraminic AcidNerve Tissue ProteinsNeuraminic AcidsNeuraminidaseAmino SugarsN-Acetylneuraminic AcidNerve Tissue ProteinsNeuraminic AcidsNeuraminidaseN-glycolylneuraminic acid

Identifiers

PMID22692207
PMCPMC3436535
OpenAlexW2016532952

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.