Evidence map›Paper›PMID 22690807›Full record

ArticleMolecular microbiology2012

Identification of two small regulatory RNAs linked to virulence in Brucella abortus 2308.

Clayton C Caswell, Jennifer M Gaines, Pawel Ciborowski, Derek Smith, Christoph H Borchers, Christelle M Roux, Khalid Sayood, Paul M Dunman, R Martin Roop Ii

Open access · bronzeAbstract read
In one paragraph

Article in Molecular microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
9.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 73 citations in OpenAlex.

  1. Article
  2. Review
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  6. Prokaryotic ncRNAs: Master regulators of gene expression.Current research in pharmacology and drug discovery · 2022
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  7. A comprehensive review of small regulatory RNAs inFrontiers in veterinary science · 2022
    Review
  8. Article
  9. Uncovering the Hidden Credentials ofMicrobiology and molecular biology reviews : MMBR · 2021
    Review
  10. Epitope-Based Vaccine of aFrontiers in immunology · 2021
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. BASI74, a Virulence-Related sRNA inFrontiers in microbiology · 2018
    Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Clayton C CaswellDepartment of Microbiology and Immunology, East Carolina University School of Medicine, Greenville, NC 27834, USA.
Jennifer M Gaines
Pawel Ciborowski
Derek Smith
Christoph H Borchers
Christelle M Roux
Khalid Sayood
Paul M Dunman
R Martin Roop Ii
East Carolina University · USUniversity of Rochester Medical Center · USUniversity of Victoria · CAUniversity of Nebraska–Lincoln · USUniversity of Nebraska Medical Center · US

Funding

Therapeutics Core (Page 286)P30MH062261 · NIMH · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI GENDELMAN, HOWARD E · 2000 to 2021
$37.7M
BRUCELLA STATIONARY PHASE GENE EXPRESSION AND VIRULENCER01AI048499 · NIAID · LOUISIANA STATE UNIV HSC SHREVEPORT · PI ROOP, ROY M · 2000 to 2010
$2.8M
Brucella Stationary Phase Gene Expression and VirulenceR21AI048499 · NIAID · EAST CAROLINA UNIVERSITY · PI ROOP, ROY M · 2004 to 2004
$377k
NIAID NIH HHS AI48499NIAID NIH HHS R01 AI048499NIAID NIH HHS R21 AI048499NIMH NIH HHS P30 MH062261
6 · The paper itself

Abstract

Hfq is an RNA-binding protein that functions in post-transcriptional gene regulation by mediating interactions between mRNAs and small regulatory RNAs (sRNAs). Two proteins encoded by BAB1_1794 and BAB2_0612 are highly over-produced in a Brucella abortus hfq mutant compared with the parental strain, and recently, expression of orthologues of these proteins in Agrobacterium tumefaciens was shown to be regulated by two sRNAs, called AbcR1 and AbcR2. Orthologous sRNAs (likewise designated AbcR1 and AbcR2) have been identified in B. abortus 2308. In Brucella, abcR1 and abcR2 single mutants are not defective in their ability to survive in cultured murine macrophages, but an abcR1 abcR2 double mutant exhibits significant attenuation in macrophages. Additionally, the abcR1 abcR2 double mutant displays significant attenuation in a mouse model of chronic Brucella infection. Quantitative proteomics and microarray analyses revealed that the AbcR sRNAs predominantly regulate genes predicted to be involved in amino acid and polyamine transport and metabolism, and Northern blot analyses indicate that the AbcR sRNAs accelerate the degradation of the target mRNAs. In an Escherichia coli two-plasmid reporter system, overexpression of either AbcR1 or AbcR2 was sufficient for regulation of target mRNAs, indicating that the AbcR sRNAs from B. abortus 2308 perform redundant regulatory functions.

Indexed as

Gene Expression Regulation, BacterialAnimalsBacterial ProteinsBlotting, NorthernBrucella abortusBrucellosisDisease Models, AnimalGene DeletionGene Expression ProfilingHost Factor 1 ProteinMacrophagesMiceMicroarray AnalysisMicrobial ViabilityProteomeRNA, BacterialBacterial ProteinsHost Factor 1 ProteinProteomeRNA, BacterialRNA, Small InterferingVirulence Factors

Identifiers

PMID22690807
PMCPMC3391331
OpenAlexW2123236981

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.