Evidence map›Paper›PMID 22685165›Full record

ArticleThe Plant cell2012

Fe sparing and Fe recycling contribute to increased superoxide dismutase capacity in iron-starved Chlamydomonas reinhardtii.

M Dudley Page, Michael D Allen, Janette Kropat, Eugen I Urzica, Steven J Karpowicz, Scott I Hsieh, Joseph A Loo, Sabeeha S Merchant

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 84 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Cellular response ofFrontiers in plant science · 2023
    Article
  8. Review
  9. Article
  10. Article
  11. Photoprotection during iron deficiency is mediated by the bHLH transcription factors PYE and ILR3.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  12. Review
  13. Article
  14. Article
  15. Single-cell visualization and quantification of trace metals inProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  16. Molecular Mechanisms Underlying the Acclimation ofFrontiers in plant science · 2021
    Article
  17. Comparative Analysis of ROS Network Genes in Extremophile Eukaryotes.International journal of molecular sciences · 2020
    Article
  18. Regulation of Iron Homeostasis and Use in Chloroplasts.International journal of molecular sciences · 2020
    Review
  19. Article
  20. Manganese co-localizes with calcium and phosphorus inThe Journal of biological chemistry · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

M Dudley PageDepartment of Chemistry and Biochemistry, University of California, Los Angeles, California 90095-1569, USA.
Michael D Allen
Janette Kropat
Eugen I Urzica
Steven J Karpowicz
Scott I Hsieh
Joseph A Loo
Sabeeha S Merchant
University of California, Los Angeles · US

Funding

UCLA NIGMS T32 Program AssessmentT32GM007185 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI TORRES, JORGE · 1985 to 2020
$21.7M
Function, Localization, and Expression of Chl27F31GM077066 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ALLEN, MICHAEL D · 2006 to 2007
$60k
NIGMS NIH HHS F31 GM077066NIGMS NIH HHS GM07185NIGMS NIH HHS GM077066NIGMS NIH HHS T32 GM007185
6 · The paper itself

Abstract

Fe deficiency is one of several abiotic stresses that impacts plant metabolism because of the loss of function of Fe-containing enzymes in chloroplasts and mitochondria, including cytochromes, FeS proteins, and Fe superoxide dismutase (FeSOD). Two pathways increase the capacity of the Chlamydomonas reinhardtii chloroplast to detoxify superoxide during Fe limitation stress. In one pathway, MSD3 is upregulated at the transcriptional level up to 10(3)-fold in response to Fe limitation, leading to synthesis of a previously undiscovered plastid-specific MnSOD whose identity we validated immunochemically. In a second pathway, the plastid FeSOD is preferentially retained over other abundant Fe proteins, heme-containing cytochrome f, diiron magnesium protoporphyrin monomethyl ester cyclase, and Fe2S2-containing ferredoxin, demonstrating prioritized allocation of Fe within the chloroplast. Maintenance of FeSOD occurs, after an initial phase of degradation, by de novo resynthesis in the absence of extracellular Fe, suggesting the operation of salvage mechanisms for intracellular recycling and reallocation.

Indexed as

Amino Acid SequenceChlamydomonas reinhardtiiChloroplast ProteinsChloroplastsCytochromes fFerredoxinsGene Expression Regulation, PlantGenes, PlantHydrogen PeroxideIronMolecular Sequence DataStress, PhysiologicalSuperoxide DismutaseChloroplast ProteinsCytochromes fFerredoxinsHydrogen PeroxideIronSuperoxide Dismutase

Identifiers

PMID22685165
PMCPMC3406916
OpenAlexW2096189935

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.