Evidence map›Paper›PMID 22684101›Full record

ArticleThe Journal of clinical investigation2012

DNA repair is indispensable for survival after acute inflammation.

Jennifer A Calvo, Lisiane B Meira, Chun-Yue I Lee, Catherine A Moroski-Erkul, Nona Abolhassani, Koli Taghizadeh, Lindsey W Eichinger, Sureshkumar Muthupalani, Line M Nordstrand, Arne Klungland and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed, 1 pooled it
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 1 synthesis or guideline pooled it, 76 citations in OpenAlex.

  1. Pooled it
  2. Predictive Analysis and Validation of Critical Missense SNPs of theInternational journal of molecular sciences · 2025
    Review
  3. Article
  4. Article
  5. DNA Alkylation Damage by Nitrosamines and Relevant DNA Repair Pathways.International journal of molecular sciences · 2023
    Review
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Recognition of 1,The Journal of biological chemistry · 2020
    Article
  17. Article
  18. Review
  19. N(6)-Methyladenine in eukaryotes.Cellular and molecular life sciences : CMLS · 2019
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Jennifer A CalvoDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA
Lisiane B Meira
Chun-Yue I Lee
Catherine A Moroski-Erkul
Nona Abolhassani
Koli Taghizadeh
Lindsey W Eichinger
Sureshkumar Muthupalani
Line M Nordstrand
Arne Klungland
Leona D Samson
Center for Environmental Health · USMassachusetts Institute of Technology · USOslo University Hospital · NO

Funding

TOXICOLOGY CORE UNITP30ES002109 · NIEHS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI LEVINE, STUART S · 1985 to 2020
$25.6M
TRAINING GRANTS IN ENVIROMENTAL TOXICOLOGYT32ES007020 · NIEHS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI ESSIGMANN, JOHN M · 1985 to 2024
$13.1M
IN VIVO ROLE OF DNA ALKYLATION REPAIRR01CA075576 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI SAMSON, LEONA D. · 1997 to 2011
$4.9M
EUKARYTIC DNA ALKYLATION REPAIRR01CA055042 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI SAMSON, LEONA D. · 1991 to 2010
$4.8M
The influence of DNA repair on inflammation associated carcinogenesisR01CA149261 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI SAMSON, LEONA D. · 2010 to 2014
$1.7M
NCI NIH HHS R01 CA055042NCI NIH HHS R01-CA055042NCI NIH HHS R01 CA075576NCI NIH HHS R01-CA075576NCI NIH HHS R01 CA149261NCI NIH HHS R01-CA149261NIEHS NIH HHS P30 ES002109NIEHS NIH HHS P30-ES02109NIEHS NIH HHS T32 ES007020NIEHS NIH HHS T32-ES007020
6 · The paper itself

Abstract

More than 15% of cancer deaths worldwide are associated with underlying infections or inflammatory conditions, therefore understanding how inflammation contributes to cancer etiology is important for both cancer prevention and treatment. Inflamed tissues are known to harbor elevated etheno-base (ε-base) DNA lesions induced by the lipid peroxidation that is stimulated by reactive oxygen and nitrogen species (RONS) released from activated neutrophils and macrophages. Inflammation contributes to carcinogenesis in part via RONS-induced cytotoxic and mutagenic DNA lesions, including ε-base lesions. The mouse alkyl adenine DNA glycosylase (AAG, also known as MPG) recognizes such base lesions, thus protecting against inflammation-associated colon cancer. Two other DNA repair enzymes are known to repair ε-base lesions, namely ALKBH2 and ALKBH3; thus, we sought to determine whether these DNA dioxygenase enzymes could protect against chronic inflammation-mediated colon carcinogenesis. Using established chemically induced colitis and colon cancer models in mice, we show here that ALKBH2 and ALKBH3 provide cancer protection similar to that of the DNA glycosylase AAG. Moreover, Alkbh2 and Alkbh3 each display apparent epistasis with Aag. Surprisingly, deficiency in all 3 DNA repair enzymes confers a massively synergistic phenotype, such that animals lacking all 3 DNA repair enzymes cannot survive even a single bout of chemically induced colitis.

Indexed as

DNA RepairAlkB Homolog 2, Alpha-Ketoglutarate-Dependent DioxygenaseAlkB Homolog 3, Alpha-Ketoglutarate-Dependent DioxygenaseAnimalsAzoxymethaneCarcinogensColitisColonColorectal NeoplasmsDextran SulfateDioxygenasesDNA GlycosylasesDNA Repair EnzymesEpistasis, GeneticFemaleGenetic Predisposition to Disease3-methyladenine-DNA glycosylaseAlkbh2 protein, mouseAlkbh3 protein, mouseAlkB Homolog 2, Alpha-Ketoglutarate-Dependent DioxygenaseAlkB Homolog 3, Alpha-Ketoglutarate-Dependent DioxygenaseAzoxymethaneCarcinogensDextran SulfateDioxygenasesDNA GlycosylasesDNA Repair EnzymesLipopolysaccharides

Identifiers

PMID22684101
PMCPMC3386829
OpenAlexW2126560726

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.