Evidence map›Paper›PMID 22683511›Full record

ArticleFEBS letters2012

Association of a multi-synthetase complex with translating ribosomes in the archaeon Thermococcus kodakarensis.

Medha Raina, Sara Elgamal, Thomas J Santangelo, Michael Ibba

Abstract read
In one paragraph

Article in FEBS letters, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Aminoacyl-tRNA synthetase complexes in evolution.International journal of molecular sciences · 2015
    Review
  8. Article
  9. Article
  10. Architecture and metamorphosis.Topics in current chemistry · 2014
    Review
  11. Emergence and evolution.Topics in current chemistry · 2014
    Review
  12. Article
  13. Citric acid cycle and the origin of MARS.Trends in biochemical sciences · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Medha RainaOhio State Biochemistry Program, Ohio State University, Columbus, OH 43210, USA.
Sara Elgamal
Thomas J Santangelo
Michael Ibba
The Ohio State University · US

Funding

Mechanisms of translational controlR01GM065183 · NIGMS · OHIO STATE UNIVERSITY · PI DUNHAM, CHRISTINE M, FREDRICK, KURT L · 2003 to 2020
$4.9M
Mechanisms of Archaeal Transcription Termination - Administrative SupplementR01GM100329 · NIGMS · OHIO STATE UNIVERSITY · PI SANTANGELO, THOMAS JAMES · 2012 to 2021
$2.5M
NIGMS NIH HHS GM100329-01NIGMS NIH HHS GM65183NIGMS NIH HHS R01 GM065183NIGMS NIH HHS R01 GM100329
6 · The paper itself

Abstract

In archaea and eukaryotes aminoacyl-tRNA synthetases (aaRSs) associate in multi-synthetase complexes (MSCs), however the role of such MSCs in translation is unknown. MSC function was investigated in vivo in the archaeon Thermococcus kodakarensis, wherein six aaRSs were affinity co-purified together with several other factors involved in protein synthesis, suggesting that MSCs may interact directly with translating ribosomes. In support of this hypothesis, the aminoacyl-tRNA synthetase (aaRS) activities of the MSC were enriched in isolated T. kodakarensis polysome fractions. These data indicate that components of the archaeal protein synthesis machinery associate into macromolecular assemblies in vivo and provide the potential to increase translation efficiency by limiting substrate diffusion away from the ribosome, thus facilitating rapid recycling of tRNAs.

Indexed as

Amino Acyl-tRNA SynthetasesLigasesPolyribosomesProtein BindingProtein BiosynthesisProtein Interaction MappingProteinsRibosomesRNA, TransferSpecies SpecificityThermococcusTime FactorsAmino Acyl-tRNA SynthetasesLigasesProteinsRNA, Transfer

Identifiers

PMID22683511
PMCPMC3407334
OpenAlexW2153091786

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.