Evidence map›Paper›PMID 22682745›Full record

ArticleStructure (London, England : 1993)2012

ATP alters the diffusion mechanics of MutS on mismatched DNA.

Won-Ki Cho, Cherlhyun Jeong, Daehyung Kim, Minhyeok Chang, Kyung-Mi Song, Jeungphill Hanne, Changill Ban, Richard Fishel, Jong-Bong Lee

Abstract read
In one paragraph

Article in Structure (London, England : 1993), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Nucleic Acids and Electrical Signals.Reviews of physiology, biochemistry and pharmacology · 2025
    Review
  6. Review
  7. Review
  8. Review
  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Review
  20. The selection process of licensing a DNA mismatch for repair.Nature structural & molecular biology · 2021
    Article

10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Won-Ki Cho *Department of Physics, Bioengineering Pohang University of Science and Technology (POSTECH), Pohang, 790-784, Korea.
Cherlhyun Jeong *Department of Physics, Bioengineering Pohang University of Science and Technology (POSTECH), Pohang, 790-784, Korea.
Daehyung KimDepartment of Physics, Bioengineering Pohang University of Science and Technology (POSTECH), Pohang, 790-784, Korea.
Minhyeok ChangDepartment of Physics, Bioengineering Pohang University of Science and Technology (POSTECH), Pohang, 790-784, Korea.
Kyung-Mi SongDepartment of Chemistry, Bioengineering Pohang University of Science and Technology (POSTECH), Pohang, 790-784, Korea.
Jeungphill HanneDepartment of Molecular Virology, Immunology and Medical Genetics The Ohio State University, Columbus, OH 43210, USA.
Changill BanDepartment of Chemistry, Bioengineering Pohang University of Science and Technology (POSTECH), Pohang, 790-784, Korea.
Richard FishelDepartment of Molecular Virology, Immunology and Medical Genetics The Ohio State University, Columbus, OH 43210, USA.
Jong-Bong LeeDepartment of Physics, Bioengineering Pohang University of Science and Technology (POSTECH), Pohang, 790-784, Korea.

Funding

The Human Mismatch Repair Proteins and CarcinogenesisR01CA067007 · NCI · UNIVERSITY OF VERMONT &ST AGRIC COLLEGE · PI Richard Fishel · 1995 to 2026
$9.6M
NCI NIH HHS CA67007NCI NIH HHS R01 CA067007
6 · The paper itself

Abstract

The mismatch repair (MMR) initiation protein MutS forms at least two types of sliding clamps on DNA: a transient mismatch searching clamp (∼1 s) and an unusually stable (∼600 s) ATP-bound clamp that recruits downstream MMR components. Remarkably, direct visualization of single MutS particles on mismatched DNA has not been reported. We have combined real-time particle tracking with fluorescence resonance energy transfer (FRET) to image MutS diffusion dynamics on DNA containing a single mismatch. We show searching MutS rotates during diffusion independent of ionic strength or flow rate, suggesting continuous contact with the DNA backbone. In contrast, ATP-bound MutS clamps that are visually and successively released from the mismatch spin freely around the DNA, and their diffusion is affected by ionic strength and flow rate. These observations show that ATP binding alters the MutS diffusion mechanics on DNA, which has a number of implications for the mechanism of MMR.

Indexed as

Adenosine TriphosphateBacterial ProteinsBase Pair MismatchDiffusionDimerizationDNADNA Mismatch RepairFluorescence PolarizationFluorescence Resonance Energy TransferFluorescent DyesKineticsMutS DNA Mismatch-Binding ProteinProtein BindingRecombinant ProteinsThermusAdenosine TriphosphateBacterial ProteinsDNAFluorescent DyesMutS DNA Mismatch-Binding ProteinRecombinant Proteins

Identifiers

PMID22682745
PMCPMC3974879

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.