Evidence map›Paper›PMID 22679283›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

Evolutionary selection of enzymatically synthesized semiconductors from biomimetic mineralization vesicles.

Lukmaan A Bawazer, Michi Izumi, Dmitriy Kolodin, James R Neilson, Birgit Schwenzer, Daniel E Morse

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Review
  3. Will tomorrow's mineral materials be grown?Microbial biotechnology · 2023
    Article
  4. Progresses in Cell-Free In Vitro Evolution.Advances in biochemical engineering/biotechnology · 2023
    Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Single-enzyme biomineralization of cadmium sulfide nanocrystals with controlled optical properties.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  10. Calcifying tissue regeneration via biomimetic materials chemistry.Journal of the Royal Society, Interface · 2014
    Review
  11. Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Lukmaan A BawazerInterdepartmental Graduate Program in Biomolecular Science and Engineering, Institute for Collaborative Biotechnologies, California NanoSystems Institute, University of California, Santa Barbara, CA 93106, USA.
Michi Izumi
Dmitriy Kolodin
James R Neilson
Birgit Schwenzer
Daniel E Morse
Institute for Collaborative BiotechnologiesUniversity of California, Santa Barbara · USCalifornia NanoSystems Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The way nature evolves and sculpts materials using proteins inspires new approaches to materials engineering but is still not completely understood. Here, we present a cell-free synthetic biological platform to advance studies of biologically synthesized solid-state materials. This platform is capable of simultaneously exerting many of the hierarchical levels of control found in natural biomineralization, including genetic, chemical, spatial, structural, and morphological control, while supporting the evolutionary selection of new mineralizing proteins and the corresponding genetically encoded materials that they produce. DNA-directed protein expression and enzymatic mineralization occur on polystyrene microbeads in water-in-oil emulsions, yielding synthetic surrogates of biomineralizing cells that are then screened by flow sorting, with light-scattering signals used to sort the resulting mineralized composites differentially. We demonstrate the utility of this platform by evolutionarily selecting newly identified silicateins, biomineralizing enzymes previously identified from the silica skeleton of a marine sponge, for enzyme variants capable of synthesizing silicon dioxide (silica) or titanium dioxide (titania) composites. Mineral composites of intermediate strength are preferentially selected to remain intact for identification during cell sorting, and then to collapse postsorting to expose the encoding genes for enzymatic DNA amplification. Some of the newly selected silicatein variants catalyze the formation of crystalline silicates, whereas the parent silicateins lack this ability. The demonstrated bioengineered route to previously undescribed materials introduces in vitro enzyme selection as a viable strategy for mimicking genetic evolution of materials as it occurs in nature.

Indexed as

BiomimeticsDirected Molecular EvolutionSemiconductorsAmino Acid SequenceAnimalsCatalysisCathepsinsEnzymesMicroscopy, Electron, TransmissionMineralsMolecular Sequence DataPoriferaSequence Homology, Amino AcidCathepsinsEnzymesMineralssilicatein alpha

Identifiers

PMID22679283
PMCPMC3387099
OpenAlexW2038453220

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.