Evidence map›Paper›PMID 22679103›Full record

ArticleJournal of molecular cell biology2012

SOX2 redirects the developmental fate of the intestinal epithelium toward a premature gastric phenotype.

Lalini Raghoebir, Elvira R M Bakker, Jason C Mills, Sigrid Swagemakers, Marjon Buscop-van Kempen, Anne Boerema-de Munck, Siska Driegen, Dies Meijer, Frank Grosveld, Dick Tibboel and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of molecular cell biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 67 citations in OpenAlex.

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  8. The developmental mechanics of divergent buckling patterns in the chick gut.Proceedings of the National Academy of Sciences of the United States of America · 2024
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  18. Tissue engineering of the gastroesophageal junction.Journal of tissue engineering and regenerative medicine · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Lalini RaghoebirDepartment of Pediatric Surgery, Erasmus Medical Center, Dr Molewaterplein 50, 3015GE Rotterdam, The Netherlands.
Elvira R M Bakker
Jason C Mills
Sigrid Swagemakers
Marjon Buscop-van Kempen
Anne Boerema-de Munck
Siska Driegen
Dies Meijer
Frank Grosveld
Dick Tibboel
Ron Smits
Robbert J Rottier
Erasmus MC · NLWashington University in St. Louis · US

Funding

Washington University DDRCC Supplemental Equipment RequestP30DK052574 · NIDDK · WASHINGTON UNIVERSITY · PI Nicholas O. Davidson · 2000 to 2026
$30.8M
MOLECULAR REGULATION OF GASTRIC CHIEF (ZYMOGENIC) CELL DIFFERENTIATIONR01DK079798 · NIDDK · WASHINGTON UNIVERSITY · PI MILLS, JASON C · 2008 to 2012
$1.6M
NIDDK NIH HHS 2P30 DK052574-12NIDDK NIH HHS R01 DK079798NIDDK NIH HHS R01 NIH DK079798-3
6 · The paper itself

Abstract

Various factors play an essential role in patterning the digestive tract. During development, Sox2 and Cdx2 are exclusively expressed in the anterior and the posterior parts of the primitive gut, respectively. However, it is unclear whether these transcription factors influence each other in determining specification of the naïve gut endoderm. We therefore investigated whether Sox2 redirects the fate of the prospective intestinal part of the primitive gut. Ectopic expression of Sox2 in the posterior region of the primitive gut caused anteriorization of the gut toward a gastric-like phenotype. Sox2 activated the foregut transcriptional program, in spite of sustained co-expression of endogenous Cdx2. However, binding of Cdx2 to its genomic targets and thus its transcriptional activity was strongly reduced. Recent findings indicate that endodermal Cdx2 is required to initiate the intestinal program and to suppress anterior cell fate. Our findings suggest that reduced Cdx2 expression by itself is not sufficient to cause anteriorization, but that Sox2 expression is also required. Moreover, it indicates that the balance between Sox2 and Cdx2 function is essential for proper specification of the primitive gut and that Sox2 may overrule the initial patterning of the primitive gut, emphasizing the plasticity of the primitive gut.

Indexed as

AnimalsCDX2 Transcription FactorCell ProliferationEndodermGastric MucosaGastrulaHomeodomain ProteinsIntestinal MucosaIntestinesMiceMice, TransgenicPhenotypeSOXB1 Transcription FactorsStomachTranscription FactorsTranscription, GeneticCdx2 protein, mouseCDX2 Transcription FactorHomeodomain ProteinsSox2 protein, mouseSOXB1 Transcription FactorsTranscription Factors

Identifiers

PMID22679103
PMCPMC3523556
OpenAlexW2125305686

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.