Evidence map›Paper›PMID 22678282›Full record

ArticleNature2012

Cis-regulatory control of corticospinal system development and evolution.

Sungbo Shim, Kenneth Y Kwan, Mingfeng Li, Veronique Lefebvre, Nenad Sestan

Open access · greenAbstract read
In one paragraph

Article in Nature, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 109 papers.

0numbers the graph read from it
0cells of the map it votes in
109citing papers in PubMed
8.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

109 citing papers in PubMed, 185 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  7. Review
  8. Review
  9. Review
  10. Article
  11. Cbln1 Directs Axon Targeting by Corticospinal Neurons Specifically toward Thoraco-Lumbar Spinal Cord.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2023
    Article
  12. Article
  13. Novel Variants ofInternational journal of molecular sciences · 2023
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

49 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Sungbo ShimDepartment of Neurobiology and Kavli Institute for Neuroscience, Yale University School of Medicine, New Haven, Connecticut 06510, USA.
Kenneth Y Kwan
Mingfeng Li
Veronique Lefebvre
Nenad Sestan
Yale University · USCleveland Clinic Lerner College of Medicine · US

Funding

Development and Organization of the Human Frontal CortexU01MH081896 · NIMH · YALE UNIVERSITY · PI SESTAN, NENAD · 2009 to 2013
$5.7M
Neurobiology of Speech and Language DevelopmentR01NS054273 · NINDS · YALE UNIVERSITY · PI SESTAN, NENAD · 2005 to 2014
$3.3M
Molecular Control of Cortical Neural Stem CellsR01HD045481 · NICHD · YALE UNIVERSITY · PI SESTAN, NENAD · 2005 to 2009
$1.6M
ROLES OF SOX C GENES IN SKELETOGENESISR01AR054153 · NIAMS · CLEVELAND CLINIC LERNER COM-CWRU · PI LEFEBVRE, VERONIQUE M · 2006 to 2010
$1.6M
NIAMS NIH HHS AR54153NIAMS NIH HHS R01 AR054153NICHD NIH HHS R01 HD045481NIMH NIH HHS MH081896NIMH NIH HHS U01 MH081896NINDS NIH HHS NS054273NINDS NIH HHS R01 NS054273
6 · The paper itself

Abstract

The co-emergence of a six-layered cerebral neocortex and its corticospinal output system is one of the evolutionary hallmarks of mammals. However, the genetic programs that underlie their development and evolution remain poorly understood. Here we identify a conserved non-exonic element (E4) that acts as a cortex-specific enhancer for the nearby gene Fezf2 (also known as Fezl and Zfp312), which is required for the specification of corticospinal neuron identity and connectivity. We find that SOX4 and SOX11 functionally compete with the repressor SOX5 in the transactivation of E4. Cortex-specific double deletion of Sox4 and Sox11 leads to the loss of Fezf2 expression, failed specification of corticospinal neurons and, independent of Fezf2, a reeler-like inversion of layers. We show evidence supporting the emergence of functional SOX-binding sites in E4 during tetrapod evolution, and their subsequent stabilization in mammals and possibly amniotes. These findings reveal that SOX transcription factors converge onto a cis-acting element of Fezf2 and form critical components of a regulatory network controlling the identity and connectivity of corticospinal neurons.

Indexed as

Evolution, MolecularAnimalsAxonsBase SequenceBinding SitesDNA-Binding ProteinsEnhancer Elements, GeneticGene Expression Regulation, DevelopmentalGenetic VariationMiceMice, KnockoutMice, TransgenicMolecular Sequence DataNeocortexNerve Tissue ProteinsOrgan SpecificityDNA-Binding ProteinsNerve Tissue ProteinsSox11 protein, mouseSox4 protein, mouseSOXC Transcription FactorsZfp312 protein, mouse

Identifiers

PMID22678282
PMCPMC3375921
OpenAlexW1997052232

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.