Evidence map›Paper›PMID 22677380›Full record

ArticleBiophysical journal2012

The influenza fusion peptide adopts a flexible flat V conformation in membranes.

Sébastien Légaré, Patrick Lagüe

Abstract read
In one paragraph

Article in Biophysical journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. All-atom virus simulations.Current opinion in virology · 2018
    Review
  7. Article
  8. Article
  9. The three lives of viral fusion peptides.Chemistry and physics of lipids · 2014
    Review
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Sébastien LégaréDépartement de Biochimie, Microbiologie et Bio-informatique, Institut de Biologie Intégrative et des Systèmes, and Centre de Recherche sur la Fonction, la Structure et l'Ingénierie des Protéines, Université Laval, Quebec City, Quebec, Canada.
Patrick Lagüe

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Knowledge about the influenza fusion peptide (FP) membrane insertion mode is crucial for understanding its fusogenic mechanism. NMR and electron paramagnetic resonance experiments showed that in micelles, the FP inserted as a fixed-angle inverted V. In membranes, however, it was shown to insert as a straight α-helix (by molecular-dynamics simulations) and to adopt multiple kinked conformations (by solid-state NMR). In this work we performed explicit-solvent molecular-dynamics simulations of the influenza FP, and its F9A and W14A mutants, in POPC membranes. The Hα1 chemical shifts predicted from the molecular-dynamics structures are in excellent agreement with the experimental values obtained for the three peptides. The peptide orientation and conformations observed from the simulations lead to a flexible flat-V model in which the peptide lies almost flat on the membrane surface and alternates between kinked and straight-helix conformations.

Indexed as

Membranes, ArtificialVirus InternalizationAmino Acid SequenceHydrogen BondingInfluenza A virusLipid BilayersMagnetic Resonance SpectroscopyModels, MolecularMolecular Sequence DataMutant ProteinsPeptidesPhosphatesPliabilityProtein Structure, SecondaryTime FactorsLipid BilayersMembranes, ArtificialMutant ProteinsPeptidesPhosphates

Identifiers

PMID22677380
PMCPMC3353013

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.