Evidence map›Paper›PMID 22676890›Full record

ReviewCurrent opinion in chemical biology2012

Synthetic in vitro circuits.

Adam J Hockenberry, Michael C Jewett

Abstract readReview
In one paragraph

Review in Current opinion in chemical biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Review
  2. Evolution and synthetic biology.Current opinion in microbiology · 2023
    Review
  3. Programmable Biomolecule-Mediated Processors.Journal of the American Chemical Society · 2023
    Review
  4. Review
  5. Article
  6. Article
  7. Artificial cell mimics as simplified models for the study of cell biology.Experimental biology and medicine (Maywood, N.J.) · 2017
    Review
  8. Cell-free synthetic biology forBiochemical Society transactions · 2017
    Review
  9. Review
  10. Supramolecular Control over Split-Luciferase Complementation.Angewandte Chemie (International ed. in English) · 2016
    Article
  11. Control theory meets synthetic biology.Journal of the Royal Society, Interface · 2016
    Review
  12. Synthetic and systems biotechnology · 2016
    Review
  13. Article
  14. Building synthetic memory.Current biology : CB · 2013
    Review
  15. Article
  16. Scaling down DNA circuits with competitive neural networks.Journal of the Royal Society, Interface · 2013
    Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Adam J HockenberryInterdepartmental Biological Sciences Graduate Program, Northwestern University, Evanston, IL 60208, USA.
Michael C Jewett

Funding

CELLULAR &MOLECULAR BASIS OF DISEASE TRAINING PROGRAMT32GM008061 · NIGMS · NORTHWESTERN UNIVERSITY · PI CARTHEW, RICHARD W. · 1985 to 2022
$17.1M
Toward construction of a synthetic self-replicating entityR00GM081450 · NIGMS · NORTHWESTERN UNIVERSITY · PI JEWETT, MICHAEL C · 2009 to 2011
$740k
NIGMS NIH HHS R00 GM081450NIGMS NIH HHS R00GM081450NIGMS NIH HHS T32 GM008061
6 · The paper itself

Abstract

Inspired by advances in the ability to construct programmable circuits in living organisms, in vitro circuits are emerging as a viable platform for designing, understanding, and exploiting dynamic biochemical circuitry. In vitro systems allow researchers to directly access and manipulate biomolecular parts without the unwieldy complexity and intertwined dependencies that often exist in vivo. Experimental and computational foundations in DNA, DNA/RNA, and DNA/RNA/protein based circuitry have given rise to systems with more than 100 programmed molecular constituents. Functionally, they have diverse capabilities including: complex mathematical calculations, associative memory tasks, and sensing of small molecules. Progress in this field is showing that cell-free synthetic biology is a versatile testing ground for understanding native biological circuits and engineering novel functionality.

Indexed as

Gene Regulatory NetworksDNAGenetic EngineeringHumansRNADNARNA

Identifiers

PMID22676890
PMCPMC3424401

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.