Evidence map›Paper›PMID 22676043›Full record

ArticleJournal of the American Chemical Society2012

Pulsed ESR dipolar spectroscopy for distance measurements in immobilized spin labeled proteins in liquid solution.

Zhongyu Yang, Yangping Liu, Peter Borbat, Jay L Zweier, Jack H Freed, Wayne L Hubbell

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed.

  1. Article
  2. Binding Affinity Determines the Success of Endogenous CuThe journal of physical chemistry letters · 2026
    Article
  3. Review
  4. Article
  5. Effect of Hydrostatic Pressure on theThe journal of physical chemistry letters · 2025
    Article
  6. Celebration of 80 years of EPR.Applied magnetic resonance · 2024
    Article
  7. Article
  8. Article
  9. Cucurbit[7]uril Enhances Distance Measurements of Spin-Labeled Proteins.Journal of the American Chemical Society · 2023
    Article
  10. A newJournal of magnetic resonance (San Diego, Calif. : 1997) · 2023
    Article
  11. GdJournal of the American Chemical Society · 2023
    Article
  12. Article
  13. Article
  14. Pulse dipolar EPR for determining nanomolar binding affinities.Chemical communications (Cambridge, England) · 2022
    Article
  15. Article
  16. Article
  17. Article
  18. Spin Labeling of Long RNAs Via Click Reaction and Enzymatic Ligation.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  19. Nanomolar Pulse Dipolar EPR Spectroscopy in Proteins: CuThe journal of physical chemistry. B · 2021
    Article
  20. Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Zhongyu YangJules Stein Eye Institute and Department of Chemistry and Biochemistry, University of California, Los Angeles, California 90095, USA.
Yangping Liu
Peter Borbat
Jay L Zweier
Jack H Freed
Wayne L Hubbell

Funding

Vision Research Core at UCLAP30EY000331 · NEI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Gregory Darin Field, DAVID S WILLIAMS · 1985 to 2026
$16.8M
X-BAND PULSE ESR SPECTROMETER FOR STUDY OF LOW-TEMPERATURE IMPURITY-HELIUM P41RR016292 · NCRR · CORNELL UNIVERSITY ITHACA · PI GEORGIEVA, ELKA R · 2001 to 2011
$14.3M
TR&D 4 for ACERT, 2017-2021 funding periodP41GM103521 · NIGMS · CORNELL UNIVERSITY · PI FREED, JACK H · 2012 to 2021
$11.7M
MOLECULAR BASIS OF MEMBRANE EXCITATIONR01EY005216 · NEI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI HUBBELL, WAYNE L · 1985 to 2019
$9.8M
ELECTRON SPIN RELAXATION IN MODEL MEMBRANESR01EB003150 · NIBIB · CORNELL UNIVERSITY ITHACA · PI FREED, JACK H · 2005 to 2016
$4.9M
MEASURE OF FREE RADICAL GENERATION IN HEARTR01HL038324 · NHLBI · OHIO STATE UNIVERSITY · PI ZWEIER, JAY LOUIS · 1992 to 2010
$3.5M
Proton Electron Double Resonance Imaging (PEDRI) of Free RadicalsR01EB004900 · NIBIB · OHIO STATE UNIVERSITY · PI ZWEIER, JAY LOUIS · 2005 to 2008
$3.4M
In Vivo EPR/NMR Co-Imaging of Free RadicalsR01EB000890 · NIBIB · OHIO STATE UNIVERSITY · PI ZWEIER, JAY LOUIS · 2002 to 2005
$2.9M
ELECTRON-SPIN RELAXATION IN MODEL MEMBRANESR01GM025862 · NIGMS · CORNELL UNIVERSITY ITHACA · PI FREED, JACK H · 1985 to 2002
$941k
MEASUREMENT OF FREE RADICAL GENERATION IN THE HEARTR29HL038324 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI ZWEIER, JAY LOUIS · 1987 to 1991
–
MOLECULAR BASIS OF MEMBRANE EXCITATIONR37EY005216 · NEI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI HUBBELL, WAYNE L · 1990 to 1999
–
NCRR NIH HHS P41 RR016292NCRR NIH HHS P41RR016292NEI NIH HHS EY00331NEI NIH HHS EY005216NEI NIH HHS P30 EY000331NEI NIH HHS R01 EY005216NEI NIH HHS R37 EY005216NHLBI NIH HHS HL38324NHLBI NIH HHS R01 HL038324NIBIB NIH HHS EB0890NIBIB NIH HHS EB4900NIBIB NIH HHS R01 EB000890NIBIB NIH HHS R01 EB003150NIBIB NIH HHS R01 EB004900NIGMS NIH HHS P41 GM103521NIGMS NIH HHS P41GM103521NIGMS NIH HHS R01 GM025862
6 · The paper itself

Abstract

Pulsed electron spin resonance (ESR) dipolar spectroscopy (PDS) in combination with site-directed spin labeling is unique in providing nanometer-range distances and distributions in biological systems. To date, most of the pulsed ESR techniques require frozen solutions at cryogenic temperatures to reduce the rapid electron spin relaxation rate and to prevent averaging of electron-electron dipolar interaction due to the rapid molecular tumbling. To enable measurements in liquid solution, we are exploring a triarylmethyl (TAM)-based spin label with a relatively long relaxation time where the protein is immobilized by attachment to a solid support. In this preliminary study, TAM radicals were attached via disulfide linkages to substituted cysteine residues at positions 65 and 80 or 65 and 76 in T4 lysozyme immobilized on Sepharose. Interspin distances determined using double quantum coherence (DQC) in solution are close to those expected from models, and the narrow distance distribution in each case indicates that the TAM-based spin label is relatively localized.

Indexed as

Bacteriophage T4CysteineElectron Spin Resonance SpectroscopyImmobilized ProteinsModels, MolecularMuramidaseSolutionsSpin LabelsWaterCysteineImmobilized ProteinsMuramidaseSolutionsSpin LabelsWater

Identifiers

PMID22676043
PMCPMC3409244

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.