Evidence map›Paper›PMID 22675590›Full record

ArticleStandards in genomic sciences2011

Complete genome sequence of the thermophilic sulfur-reducer Desulfurobacterium thermolithotrophum type strain (BSA(T)) from a deep-sea hydrothermal vent.

Markus Göker, Hajnalka Daligault, Romano Mwirichia, Alla Lapidus, Susan Lucas, Shweta Deshpande, Ioanna Pagani, Roxanne Tapia, Jan-Fang Cheng, Lynne Goodwin and 25 more

Abstract read
In one paragraph

Article in Standards in genomic sciences, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

35 authors.

Markus Göker
Hajnalka Daligault
Romano Mwirichia
Alla Lapidus
Susan Lucas
Shweta Deshpande
Ioanna Pagani
Roxanne Tapia
Jan-Fang Cheng
Lynne Goodwin
Sam Pitluck
Konstantinos Liolios
Natalia Ivanova
Konstantinos Mavromatis
Natalia Mikhailova
Amrita Pati
Amy Chen
Krishna Palaniappan
Cliff Han
Miriam Land
Loren Hauser
Chongle Pan
Evelyne-Marie Brambilla
Manfred Rohde
Stefan Spring
Johannes Sikorski
Reinhard Wirth
John C Detter
Tanja Woyke
James Bristow
Jonathan A Eisen
Victor Markowitz
Philip Hugenholtz
Nikos C Kyrpides
Hans-Peter Klenk

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Desulfurobacterium thermolithotrophum L'Haridon et al. 1998 is the type species of the genus Desulfurobacterium which belongs to the family Desulfurobacteriaceae. The species is of interest because it represents the first thermophilic bacterium that can act as a primary producer in the temperature range of 45-75 °C (optimum 70°C) and is incapable of growing under microaerophilic conditions. Strain BSA(T) preferentially synthesizes high-melting-point fatty acids (C(18) and C(20)) which is hypothesized to be a strategy to ensure the functionality of the membrane at high growth temperatures. This is the second completed genome sequence of a member of the family Desulfurobacteriaceae and the first sequence from the genus Desulfurobacterium. The 1,541,968 bp long genome harbors 1,543 protein-coding and 51 RNA genes and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

Indexed as

anaerobicDesulfurobacteriaceaeGEBAGram-negativemarineneutrophilicobligately chemolithoautotrophicsulfur-reducingthermophilic

Identifiers

PMID22675590
PMCPMC3368423

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.