Evidence map›Paper›PMID 22673310›Full record

ArticleGenes and immunity2012

Genome-wide association study identifies common variants at TNFRSF13B associated with IgG level in a healthy Chinese male population.

M Liao, F Ye, B Zhang, L Huang, Q Xiao, M Qin, L Mo, A Tan, Y Gao, Z Lu and 7 more

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In one paragraph

Article in Genes and immunity, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

17 authors at 2 institutions in 1 country.

M LiaoInstitute of Urology and Nephrology, First Affiliated Hospital of Guangxi Medical University, Nanning, China.
F Ye
B Zhang
L Huang
Q Xiao
M Qin
L Mo
A Tan
Y Gao
Z Lu
C Wu
Y Zhang
H Zhang
X Qin
Y Hu
X Yang
Z Mo
Guangxi Medical University · CNFirst Affiliated Hospital of GuangXi Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

IgG has a crucial role in humoral immune response. Serum IgG level is mainly determined under genetic control. To explore the genetic influence on serum IgG levels, a two-stage genome-wide association study (GWAS) was performed in a healthy Chinese population of 3495 men, including 1999 unrelated subjects in the first stage and 1496 independent individuals in the second stage. Three single-nucleotide polymorphisms (SNPs) located in TNFRSF13B on 17p11.2 or nearby were significantly associated with IgG level: rs4792800 in the intron (combined P-value=1.45 × 10(-12)), rs12603708 in the intron (combined P-value=1.82 × 10(-8)) and rs3751987 at ~65 kb downstream of the 5'-UTR region of TNFRSF13B (combined P-value=3.67 × 10(-9)). Additionally, smoking was identified to be associated with IgG level in both stages (P<0.001), but there was no significant interaction between smoking and the identified SNPs (P>0.05). The strong association between variants at TNFRSF13B and IgG level may be helpful to further explore the biological mechanism by which the serum IgG is affected by transmembrane activator, calcium modulator and cyclophilin ligand interactor encoded by TNFRSF13B.

Indexed as

Polymorphism, Single NucleotideAdultAgedAsian PeopleChinaGenome-Wide Association StudyHumansImmunity, HumoralImmunoglobulin GMaleMiddle AgedTransmembrane Activator and CAML Interactor ProteinYoung AdultImmunoglobulin GTNFRSF13B protein, humanTransmembrane Activator and CAML Interactor Protein

Identifiers

PMID22673310
OpenAlexW2029043293

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.