Evidence map›Paper›PMID 22672435›Full record

ArticleBMC medical informatics and decision making2012

Glomerular disease search filters for Pubmed, Ovid Medline, and Embase: a development and validation study.

Ainslie M Hildebrand, Arthur V Iansavichus, Christopher W C Lee, R Brian Haynes, Nancy L Wilczynski, K Ann McKibbon, Michelle A Hladunewich, William F Clark, Daniel C Cattran, Amit X Garg

Abstract read
In one paragraph

Article in BMC medical informatics and decision making, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. An automated system for retrieving herb-drug interaction related articles from MEDLINE.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science · 2016
    Article
  3. Automated Determination of Publications Related to Adverse Drug Reactions in PubMed.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Ainslie M HildebrandDivision of Nephrology, University of Western Ontario, London, Canada.
Arthur V Iansavichus
Christopher W C Lee
R Brian Haynes
Nancy L Wilczynski
K Ann McKibbon
Michelle A Hladunewich
William F Clark
Daniel C Cattran
Amit X Garg

Funding

Canadian Institutes of Health Research
6 · The paper itself

Abstract

backgroundTools to enhance physician searches of Medline and other bibliographic databases have potential to improve the application of new knowledge in patient care. This is particularly true for articles about glomerular disease, which are published across multiple disciplines and are often difficult to track down. Our objective was to develop and test search filters for PubMed, Ovid Medline, and Embase that allow physicians to search within a subset of the database to retrieve articles relevant to glomerular disease.

methodsWe used a diagnostic test assessment framework with development and validation phases. We read a total of 22,992 full text articles for relevance and assigned them to the development or validation set to define the reference standard. We then used combinations of search terms to develop 997,298 unique glomerular disease filters. Outcome measures for each filter included sensitivity, specificity, precision, and accuracy. We selected optimal sensitive and specific search filters for each database and applied them to the validation set to test performance.

resultsHigh performance filters achieved at least 93.8% sensitivity and specificity in the development set. Filters optimized for sensitivity reached at least 96.7% sensitivity and filters optimized for specificity reached at least 98.4% specificity. Performance of these filters was consistent in the validation set and similar among all three databases.

conclusionsPubMed, Ovid Medline, and Embase can be filtered for articles relevant to glomerular disease in a reliable manner. These filters can now be used to facilitate physician searching.

Indexed as

Kidney DiseasesValidation Studies as TopicBibliometricsClinical CompetenceDatabases, BibliographicHumansInformation Storage and RetrievalMedical Subject HeadingsMEDLINEPubMedReproducibility of ResultsSensitivity and SpecificityVocabulary, Controlled

Identifiers

PMID22672435
PMCPMC3471011

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.