ArticleG3 (Bethesda, Md.)2012
Comparative Genetic Mapping and Discovery of Linkage Disequilibrium Across Linkage Groups in White Clover (Trifolium repens L.).
Article in G3 (Bethesda, Md.), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
16 citing papers in PubMed.
- Genetics and plasticity of white leaf mark variegation in white clover (Trifolium repens L.).Annals of botany · 2024Article
- Near-complete telomere-to-telomere de novo genome assembly in Egyptian clover (Trifolium alexandrinum).DNA research : an international journal for rapid publication of reports on genes and genomes · 2024Article
- Chromosome and Genome Diversity in the GenusPlants (Basel, Switzerland) · 2021Review
- Genetic diversity and population structure analysis in a large collection of white clover (PeerJ · 2021Article
- Understanding the Complexity of Cold Tolerance in White Clover using Temperature Gradient Locations and a GWAS Approach.The plant genome · 2018Article
- Red Clover (Frontiers in plant science · 2018Article
- Gene Classification and Mining of Molecular Markers Useful in Red Clover (Frontiers in plant science · 2017Article
- A gene-based map of the Nod factor-independent Aeschynomene evenia sheds new light on the evolution of nodulation and legume genomes.DNA research : an international journal for rapid publication of reports on genes and genomes · 2016Article
- Red clover (Trifolium pratense L.) draft genome provides a platform for trait improvement.Scientific reports · 2015Article
- Kazusa Marker DataBase: a database for genomics, genetics, and molecular breeding in plants.Breeding science · 2014Article
- Development of EST-SSR markers and construction of a linkage map in faba bean (Vicia faba).Breeding science · 2014Article
- Plant Genome DataBase Japan (PGDBj): a portal website for the integration of plant genome-related databases.Plant & cell physiology · 2014Article
- SNP marker discovery, linkage map construction and identification of QTLs for enhanced salinity tolerance in field pea (Pisum sativum L.).BMC plant biology · 2013Article
- An integrated genetic linkage map for white clover (Trifolium repens L.) with alignment to Medicago.BMC genomics · 2013Article
- An Ultra-High-Density, Transcript-Based, Genetic Map of Lettuce.G3 (Bethesda, Md.) · 2013Article
- Integrated consensus map of cultivated peanut and wild relatives reveals structures of the A and B genomes of Arachis and divergence of the legume genomes.DNA research : an international journal for rapid publication of reports on genes and genomes · 2013Article
Corrections and comments
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Authors and funding
15 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
White clover (Trifolium repens L.) is an allotetraploid species (2n = 4X = 32) that is widely distributed in temperate regions and cultivated as a forage legume. In this study, we developed expressed sequence tag (EST)-derived simple sequence repeat (SSR) markers, constructed linkage maps, and performed comparative mapping with other legume species. A total of 7982 ESTs that could be assembled into 5400 contigs and 2582 singletons were generated. Using the EST sequences that were obtained, 1973 primer pairs to amplify EST-derived SSR markers were designed and used for linkage analysis of 188 F(1) progenies, which were generated by a cross between two Japanese plants, '273-7' and 'T17-349,' with previously published SSR markers. An integrated linkage map was constructed by combining parental-specific maps, which consisted of 1743 SSR loci on 16 homeologous linkage groups with a total length of 2511 cM. The primer sequences of the developed EST-SSR markers and their map positions are available on http://clovergarden.jp/. Linkage disequilibrium (LD) was observed on 9 of 16 linkage groups of a parental-specific map. The genome structures were compared among white clover, red clover (T. pratense L.), Medicago truncatula, and Lotus japonicus. Macrosynteny was observed across the four legume species. Surprisingly, the comparative genome structure between white clover and M. truncatula had a higher degree of conservation than that of the two clover species.
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