Evidence map›Paper›PMID 22670227›Full record

ArticleG3 (Bethesda, Md.)2012

Regulated Expression of Chromobox Homolog 5 Revealed in Tumors of Apc(Min) (/+) ROSA11 Gene Trap Mice.

Andrew T Thliveris, Linda Clipson, Lacy L Sommer, Barry A Schoenike, Jason R Hasenstein, Cassandra L Schlamp, Caroline M Alexander, Michael A Newton, William F Dove, James M Amos-Landgraf

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Andrew T Thliveris
Linda Clipson
Lacy L Sommer
Barry A Schoenike
Jason R Hasenstein
Cassandra L Schlamp
Caroline M Alexander
Michael A Newton
William F Dove
James M Amos-Landgraf
Center for Cancer Research · USInstitute for Medical Informatics and Biostatistics · CHUniversity of Wisconsin–Madison · USWilliam S. Middleton Memorial Veterans Hospital · US

Funding

GENES CONTROLLING NEOPLASIA OF THE INTESTINAL EPITHELIUMR37CA063677 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI DOVE, WILLIAM FRANKLIN · 1998 to 2008
$6.3M
MOUSE MODELS FOR HUMAN CANCERU01CA084227 · NCI · UNIVERSITY OF WISCONSIN MADISON · PI DOVE, WILLIAM FRANKLIN · 1999 to 2003
$1.9M
CELL CYCLE, DEVELOPMENT, AND NEOPLASIAR01CA063677 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI DOVE, WILLIAM FRANKLIN · 1993 to 2012
$1.4M
NCI NIH HHS R01 CA063677NCI NIH HHS R37 CA063677
6 · The paper itself

Abstract

The gene-trap lacZ reporter insertion, ROSA11, in the Cbx5 mouse gene illuminates the regulatory complexity of this locus in Apc(Min) (/+) mice. The insertion site of the β-Geo gene-trap element lies in the 24-kb intron proximal to the coding region of Cbx5. Transcript analysis indicates that two promoters for Cbx5 flank this insertion site. Heterozygotes for the insertion express lacZ widely in fetal tissues but show limited expression in adult tissues. In the intestine, strong expression is limited to proliferative zones of crypts and tumors. Homozygotes for ROSA11, found at a lower than Mendelian frequency, express reduced levels of the coding region transcript in normal tissues, using a downstream promoter. Analysis via real-time polymerase chain reaction indicates that the upstream promoter is the dominant promoter in normal epithelium and tumors. Bioinformatic analysis of the Cbx5 locus indicates that WNT and its target transcription factor MYC can establish a feedback loop that may play a role in regulating the self-renewal of the normal intestinal epithelium and its tumors.

Indexed as

cancer progenitorCre driverslacZ reporterWNT signaling

Identifiers

PMID22670227
PMCPMC3362940
OpenAlexW2169393618

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.