Evidence map›Paper›PMID 22669842›Full record

ArticlePhysiological genomics2012

Role of genetic modifiers in an orthologous rat model of ARPKD.

Caitlin C O'Meara, Matthew Hoffman, William E Sweeney, Shirng-Wern Tsaih, Bing Xiao, Howard J Jacob, Ellis D Avner, Carol Moreno

Abstract read
In one paragraph

Article in Physiological genomics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 26 citations in OpenAlex.

  1. Pkhd1Journal of molecular medicine (Berlin, Germany) · 2023
    Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Knockout ofAmerican journal of physiology. Renal physiology · 2019
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Genetic and phenotypic characterization of a Japanese wild-derived DOB/Oda rat strain.Mammalian genome : official journal of the International Mammalian Genome Society · 2013
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Caitlin C O'MearaDepartment of Physiology, Medical College of Wisconsin, Milwaukee, Wisconsin, USA.
Matthew Hoffman
William E Sweeney
Shirng-Wern Tsaih
Bing Xiao
Howard J Jacob
Ellis D Avner
Carol Moreno
Medical College of Wisconsin · US

Funding

Integrative Biology of Childhood Kidney DiseaseP50DK079306 · NIDDK · MEDICAL COLLEGE OF WISCONSIN · PI AVNER, ELLIS DAVID · 2007 to 2011
$5.1M
NIDDK NIH HHS 1-P50 DK-079306NIDDK NIH HHS P50 DK079306
6 · The paper itself

Abstract

Human data and animal models of autosomal recessive polycystic kidney disease (ARPKD) suggest that genetic factors modulate the onset and severity of the disease. We report here for the first time that ARPKD susceptibility is attenuated by introgressing the mutated Pkhd1 disease allele from the polycystic kidney (PCK) rat onto the FHH (Fawn-Hooded Hypertensive) genetic background. Compared with PCK, the FHH.Pkhd1 strain had significantly decreased renal cyst formation that coincided with a threefold reduction in mean kidney weights. Further analysis revealed that the FHH. Pkhd1 is protected from increased blood pressure as well as elevated plasma creatinine and blood urea nitrogen levels. On the other hand, liver weight and biliary cystogenesis revealed no differences between PCK and FHH.Pkdh1, indicating that genes within the FHH genetic background prevent the development of renal, but not hepatic, manifestations of ARPKD. Microarray expression analysis of kidneys from 30-day-old PCK rats revealed increased expression of genes previously identified in PKD renal expression profiles, such as inflammatory response, extracellular matrix synthesis, and cell proliferation genes among others, whereas the FHH.Pkhd1 did not show activation of these common markers of disease. This newly developed strain can serve as a tool to map modifier genes for renal disease in ARPKD and provides further insight into disease variability and pathophysiology.

Indexed as

Disease Models, AnimalAnimalsBlood PressureDown-RegulationFemaleGene Expression ProfilingGene Regulatory NetworksGenes, ModifierHumansKidneyKidney Function TestsLiverMaleMutationOligonucleotide Array Sequence AnalysisOrgan SizePKHD1 protein, ratReceptors, Cell Surface

Identifiers

PMID22669842
PMCPMC3774585
OpenAlexW2147163401

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.