Evidence map›Paper›PMID 22665589›Full record

ArticleCBE life sciences education2012

Studying human disease genes in Caenorhabditis elegans: a molecular genetics laboratory project.

Elisabeth A Cox-Paulson, Theresa M Grana, Michelle A Harris, Janet M Batzli

Open access · hybridAbstract read
In one paragraph

Article in CBE life sciences education, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.8field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 19 citations in OpenAlex.

  1. AJournal of microbiology & biology education · 2026
    Article
  2. Article
  3. A modular laboratory course using planarians to study genes involved in tissue regeneration.Biochemistry and molecular biology education : a bimonthly publication of the International Union of Biochemistry and Molecular Biology · 2019
    Article
  4. Article
  5. An investigative graduate laboratory course for teaching modern DNA techniques.Biochemistry and molecular biology education : a bimonthly publication of the International Union of Biochemistry and Molecular Biology · 2017
    Article
  6. Article
  7. Re: misconceptions are "so yesterday!".CBE life sciences education · 2014
    Article
  8. Misconceptions are "so yesterday!".CBE life sciences education · 2013
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Elisabeth A Cox-PaulsonDepartment of Biology, SUNY College at Geneseo, Geneseo, NY 14454, USA. coxe@geneseo.edu
Theresa M Grana
Michelle A Harris
Janet M Batzli
University of Wisconsin–Madison · USSUNY Geneseo · USUniversity of Mary Washington · US

Funding

Analysis of Tropomodulin Function During Endothelial Tube DevelopmentR15HD059952 · NICHD · COLLEGE AT GENESEO · PI COX-PAULSON, ELISABETH A. · 2009 to 2009
$213k
NICHD NIH HHS R15 HD059952NICHD NIH HHS R15-HD059952
6 · The paper itself

Abstract

Scientists routinely integrate information from various channels to explore topics under study. We designed a 4-wk undergraduate laboratory module that used a multifaceted approach to study a question in molecular genetics. Specifically, students investigated whether Caenorhabditis elegans can be a useful model system for studying genes associated with human disease. In a large-enrollment, sophomore-level laboratory course, groups of three to four students were assigned a gene associated with either breast cancer (brc-1), Wilson disease (cua-1), ovarian dysgenesis (fshr-1), or colon cancer (mlh-1). Students compared observable phenotypes of wild-type C. elegans and C. elegans with a homozygous deletion in the assigned gene. They confirmed the genetic deletion with nested polymerase chain reaction and performed a bioinformatics analysis to predict how the deletion would affect the encoded mRNA and protein. Students also performed RNA interference (RNAi) against their assigned gene and evaluated whether RNAi caused a phenotype similar to that of the genetic deletion. As a capstone activity, students prepared scientific posters in which they presented their data, evaluated whether C. elegans was a useful model system for studying their assigned genes, and proposed future directions. Assessment showed gains in understanding genotype versus phenotype, RNAi, common bioinformatics tools, and the utility of model organisms.

Indexed as

CurriculumLaboratoriesAnimalsCaenorhabditis elegansComprehensionComputational BiologyDiseaseEducational MeasurementFemaleGene DeletionGenes, HelminthGenotypeHumansKnowledgeMaleMental Competency

Identifiers

PMID22665589
PMCPMC3366902
OpenAlexW2113494806

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.