Evidence map›Paper›PMID 22665234›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2012

Genotyping of single nucleotide polymorphisms by 5' nuclease allelic discrimination.

Mari Malkki, Effie W Petersdorf

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Role ofJournal of clinical medicine · 2024
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  18. High HLA-DP Expression and Graft-versus-Host Disease.The New England journal of medicine · 2015
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Mari MalkkiFred Hutchinson Cancer Research Centre, Seattle, WA, USA.
Effie W Petersdorf

Funding

Hematopopietic Stem Cell TransplantationU01AI069197 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Effie W Petersdorf · 2005 to 2026
$18.9M
NIAID NIH HHS U01 AI069197
6 · The paper itself

Abstract

Real-time quantitative PCR is an efficient method for high-throughput genotyping of single nucleotide polymorphisms (SNPs). In this chapter, we describe the 5' nuclease allelic discrimination assay for genotyping biallelic SNPs.

Indexed as

Alleles5'-NucleotidaseGenotypeGenotyping TechniquesHumansPolymorphism, Single NucleotideReal-Time Polymerase Chain Reaction5'-Nucleotidase

Identifiers

PMID22665234
PMCPMC3887036

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.