Evidence map›Paper›PMID 22663077›Full record

ReviewAnnual review of biochemistry2012

The COMPASS family of histone H3K4 methylases: mechanisms of regulation in development and disease pathogenesis.

Ali Shilatifard

Abstract readReview
In one paragraph

Review in Annual review of biochemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 687 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
687citing papers in PubMed, 1 pooled it
28.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

687 citing papers in PubMed, 1 synthesis or guideline pooled it, 1,097 citations in OpenAlex.

  1. Pooled it
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  9. Variable Expressiveness of a Novel PathogenicDiseases (Basel, Switzerland) · 2026
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  15. Ketogenic Diet as an Epigenetic Therapy in SETD1B-Related Epilepsy.Annals of clinical and translational neurology · 2026
    Article
  16. Review
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627 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Ali ShilatifardStowers Institute for Medical Research, Kansas City, Missouri 64110, USA. ASH@Stowers.org
Stowers Institute for Medical Research · US

Funding

Chromatin Modifications by Histone Ubiquitination and MethylationsR01GM069905 · NIGMS · STOWERS INSTITUTE FOR MEDICAL RESEARCH · PI SHILATIFARD, ALI · 2004 to 2015
$4.7M
Physiological Role of MLL and ELL Proteins in LeukemiaR01CA089455 · NCI · STOWERS INSTITUTE FOR MEDICAL RESEARCH · PI SHILATIFARD, ALI · 2001 to 2015
$3.5M
The COMPASS family of H3K4 methylases in development and cancerR01CA150265 · NCI · STOWERS INSTITUTE FOR MEDICAL RESEARCH · PI SHILATIFARD, ALI · 2010 to 2015
$2.9M
NCI NIH HHS R01 CA089455NCI NIH HHS R01 CA150265NCI NIH HHS R01CA150265NCI NIH HHS R01CA89455NIGMS NIH HHS R01 GM069905NIGMS NIH HHS R01GM069905
6 · The paper itself

Abstract

The Saccharomyces cerevisiae Set1/COMPASS was the first histone H3 lysine 4 (H3K4) methylase identified over 10 years ago. Since then, it has been demonstrated that Set1/COMPASS and its enzymatic product, H3K4 methylation, is highly conserved across the evolutionary tree. Although there is only one COMPASS in yeast, Drosophila possesses three and humans bear six COMPASS family members, each capable of methylating H3K4 with nonredundant functions. In yeast, the histone H2B monoubiquitinase Rad6/Bre1 is required for proper H3K4 and H3K79 trimethylations. The machineries involved in this process are also highly conserved from yeast to human. In this review, the process of histone H2B monoubiquitination-dependent and -independent histone H3K4 methylation as a mark of active transcription, enhancer signatures, and developmentally poised genes is discussed. The misregulation of histone H2B monoubiquitination and H3K4 methylation result in the pathogenesis of human diseases, including cancer. Recent findings in this regard are also examined.

Indexed as

AnimalsDNA RepairGene Expression RegulationHistone-Lysine N-MethyltransferaseHistone MethyltransferasesHumansNeoplasmsTranscription, GeneticHistone-Lysine N-MethyltransferaseHistone Methyltransferases

Identifiers

PMID22663077
PMCPMC4010150
OpenAlexW2121910267

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.