Evidence map›Paper›PMID 22661580›Full record

ArticleNucleic acids research2012

ExPASy: SIB bioinformatics resource portal.

Panu Artimo, Manohar Jonnalagedda, Konstantin Arnold, Delphine Baratin, Gabor Csardi, Edouard de Castro, Séverine Duvaud, Volker Flegel, Arnaud Fortier, Elisabeth Gasteiger and 11 more

Abstract read
In one paragraph

Article in Nucleic acids research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1,078 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
1,078citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1,078 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
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  12. Genome-Wide Identification and Functional Verification of CoreInternational journal of molecular sciences · 2026
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  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

1,018 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Panu ArtimoVital-IT Group, SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland.
Manohar Jonnalagedda
Konstantin Arnold
Delphine Baratin
Gabor Csardi
Edouard de Castro
Séverine Duvaud
Volker Flegel
Arnaud Fortier
Elisabeth Gasteiger
Aurélien Grosdidier
Céline Hernandez
Vassilios Ioannidis
Dmitry Kuznetsov
Robin Liechti
Sébastien Moretti
Khaled Mostaguir
Nicole Redaschi
Grégoire Rossier
Ioannis Xenarios
Heinz Stockinger

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

ExPASy (http://www.expasy.org) has worldwide reputation as one of the main bioinformatics resources for proteomics. It has now evolved, becoming an extensible and integrative portal accessing many scientific resources, databases and software tools in different areas of life sciences. Scientists can henceforth access seamlessly a wide range of resources in many different domains, such as proteomics, genomics, phylogeny/evolution, systems biology, population genetics, transcriptomics, etc. The individual resources (databases, web-based and downloadable software tools) are hosted in a 'decentralized' way by different groups of the SIB Swiss Institute of Bioinformatics and partner institutions. Specifically, a single web portal provides a common entry point to a wide range of resources developed and operated by different SIB groups and external institutions. The portal features a search function across 'selected' resources. Additionally, the availability and usage of resources are monitored. The portal is aimed for both expert users and people who are not familiar with a specific domain in life sciences. The new web interface provides, in particular, visual guidance for newcomers to ExPASy.

Indexed as

Computational BiologyProteomicsSoftwareComputer GraphicsGenomicsInternetSystems IntegrationUser-Computer Interface

Identifiers

PMID22661580
PMCPMC3394269

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.