Evidence map›Paper›PMID 22661577›Full record

ArticleNucleic acids research2012

LRPPRC/SLIRP suppresses PNPase-mediated mRNA decay and promotes polyadenylation in human mitochondria.

Takeshi Chujo, Takayuki Ohira, Yuriko Sakaguchi, Naoki Goshima, Nobuo Nomura, Asuteka Nagao, Tsutomu Suzuki

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 126 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
126citing papers in PubMed, 1 pooled it
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

126 citing papers in PubMed, 1 synthesis or guideline pooled it, 193 citations in OpenAlex.

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  18. Disruption ofJournal of rare diseases (Berlin, Germany) · 2025
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66 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Takeshi ChujoDepartment of Chemistry and Biotechnology, Graduate School of Engineering, University of Tokyo, Tokyo, Japan.
Takayuki Ohira
Yuriko Sakaguchi
Naoki Goshima
Nobuo Nomura
Asuteka Nagao
Tsutomu Suzuki
National Institute of Advanced Industrial Science and Technology · JPMusashino University · JPThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In human mitochondria, 10 mRNAs species are generated from a long polycistronic precursor that is transcribed from the heavy chain of mitochondrial DNA, in theory yielding equal copy numbers of mRNA molecules. However, the steady-state levels of these mRNAs differ substantially. Through absolute quantification of mRNAs in HeLa cells, we show that the copy numbers of all mitochondrial mRNA species range from 6000 to 51,000 molecules per cell, indicating that mitochondria actively regulate mRNA metabolism. In addition, the copy numbers of mitochondrial mRNAs correlated with their cellular half-life. Previously, mRNAs with longer half-lives were shown to be stabilized by the LRPPRC/SLIRP complex, which we find that cotranscriptionally binds to coding sequences of mRNAs. We observed that the LRPPRC/SLIRP complex suppressed 3' exonucleolytic mRNA degradation mediated by PNPase and SUV3. Moreover, LRPPRC promoted the polyadenylation of mRNAs mediated by mitochondrial poly(A) polymerase (MTPAP) in vitro. These findings provide a framework for understanding the molecular mechanism of mRNA metabolism in human mitochondria.

Indexed as

PolyadenylationRNA StabilityDEAD-box RNA HelicasesDNA-Directed RNA PolymerasesHeLa CellsHumansMitochondriaMitochondrial ProteinsNeoplasm ProteinsPolyribonucleotide NucleotidyltransferaseRNARNA-Binding ProteinsRNA, MessengerRNA, MitochondrialRNA PrecursorsDEAD-box RNA HelicasesDNA-Directed RNA PolymerasesLRPPRC protein, humanMitochondrial ProteinsMTPAP protein, humanNeoplasm ProteinsPolyribonucleotide NucleotidyltransferaseRNARNA-Binding ProteinsRNA, MessengerRNA, MitochondrialRNA PrecursorsSLIRP protein, humanSUPV3L1 protein, human

Identifiers

PMID22661577
PMCPMC3439899
OpenAlexW2143309533

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.