Evidence map›Paper›PMID 22655231›Full record

ArticleFrontiers in oncology2011

Sequence Variants and the Risk of Head and Neck Cancer: Pooled Analysis in the INHANCE Consortium.

Shu-Chun Chuang, Antonio Agudo, Wolfgang Ahrens, Devasena Anantharaman, Simone Benhamou, Stefania Boccia, Chu Chen, David I Conway, Eleonora Fabianova, Richard B Hayes and 32 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in oncology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 2 pooled it
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 2 syntheses or guidelines pooled it, 17 citations in OpenAlex.

  1. The potential role ofBioscience reports · 2018
    Pooled it
  2. Pooled it
  3. Spatial Distribution of Head and Neck Cancer in Chiang Mai, Thailand.Asian Pacific journal of cancer prevention : APJCP · 2022
    Article
  4. Article
  5. Article
  6. Article
  7. Single-nucleotide polymorphisms in nucleotide excision repair genes, cigarette smoking, and the risk of head and neck cancer.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

42 authors at 20 institutions in 15 countries.

Shu-Chun ChuangLifestyle and Cancer Group, International Agency for Research on Cancer Lyon, France.
Antonio Agudo
Wolfgang Ahrens
Devasena Anantharaman
Simone Benhamou
Stefania Boccia
Chu Chen
David I Conway
Eleonora Fabianova
Richard B Hayes
Claire M Healy
Ivana Holcatova
Kristina Kjaerheim
Pagona Lagiou
Philip Lazarus
Tatiana V Macfarlane
Manoj B Mahimkar
Dana Mates
Keitaro Matsuo
Franco Merletti
Andres Metspalu
Hal Morgenstern
Joshua Muscat
Gabriella Cadoni
Andrew F Olshan
Mark Purdue
Heribert Ramroth
Peter Rudnai
Stephen M Schwartz
Lorenzo Simonato
Elaine M Smith
Erich M Sturgis
Neonilia Szeszenia-Dabrowska
Renato Talamini
Peter Thomson
Qingyi Wei
David Zaridze
Zuo-Feng Zhang
Ariana Znaor
Paul Brennan
Paolo Boffetta
Mia Hashibe
Advanced Centre for Treatment, Research and Education in Cancer · INCentre International de Recherche sur le Cancer · FRFred Hutch Cancer Center · USPenn State Milton S. Hershey Medical Center · USThe University of Texas MD Anderson Cancer Center · USAichi Cancer Center · JPCancer Registry of Norway · NOCentro di Riferimento Oncologico · ITCharles University · CZEstonian Biocentre · EEHeidelberg University · DEIcahn School of Medicine at Mount Sinai · USInserm · FRInstitut Català d'Oncologia · ESIstituti di Ricovero e Cura a Carattere Scientifico · ITLeibniz Institute for Prevention Research and Epidemiology - BIPS · DENational and Kapodistrian University of Athens · GRNational Cancer Institute · USNewcastle University · GBNew York University · US

Funding

Virology Research Program (Program 4)P30CA016086 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Deborah F. Tate · 1985 to 2026
$201.5M
UNC-CH CENTER FOR ENVIRONMENTAL HEALTH &SUSCEPTIBILITYP30ES010126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Melissa A. Troester · 2001 to 2026
$36.3M
UCLA SPORE IN LUNG CANCERP50CA090388 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DUBINETT, STEVEN M. · 2001 to 2008
$13.0M
Carolina Population CenterR24HD050924 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MORGAN, SAMUEL PHILIP · 2005 to 2014
$10.0M
UCLA CANCER EPIDEMIOLOGY TRAINING PROGRAMT32CA009142 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ZHANG, ZUO-FENG · 1986 to 2024
$6.3M
Molecular Epidemiology of Head and Neck CancerR01ES011740 · NIEHS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI WEI, QINGYI · 2001 to 2012
$6.3M
LUNG CANCER CHEMOPREVENTION WITH CELECOXIB IN EX-SMOKERSU01CA096134 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI MAO, JENNY T · 2002 to 2007
$5.1M
UDPGLUCURONOSYLTRANSFERASE GENOTYPE AND ORAL CANCER RISKR01DE013158 · NIDCR · UNIVERSITY OF SOUTH FLORIDA · PI LAZARUS, PHILIP · 2000 to 2011
$3.6M
Seroepidemiologic Study of HPV and Oral CancerR01DE013110 · NIDCR · UNIVERSITY OF IOWA · PI SMITH, ELAINE M. · 1999 to 2003
$2.5M
MARIJUANA USE AND THE RISKS OF LUNG AND OTHER CANCERSR01DA011386 · NIDA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI MORGENSTERN, HAL M · 1999 to 2003
$1.8M
Genetic Predictors for DNA Repair Phenotype in CMMR01CA100264 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI WEI, QINGYI · 2004 to 2008
$1.5M
Molecular Epidemiology and Gene-Environment InteractionR21ES011667 · NIEHS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ZHANG, ZUO-FENG · 2002 to 2004
$651k
FIC NIH HHS R03 TW001500NCI NIH HHS P30 CA016086NCI NIH HHS P50 CA090388NCI NIH HHS R01 CA048996NCI NIH HHS R01 CA100264NCI NIH HHS R03 CA077954NCI NIH HHS T32 CA009142NCI NIH HHS U01 CA096134NICHD NIH HHS R24 HD050924NIDA NIH HHS R01 DA011386NIDCR NIH HHS R01 DE013110NIDCR NIH HHS R01 DE013158NIDCR NIH HHS R03 DE016611NIEHS NIH HHS P30 ES010126NIEHS NIH HHS R01 ES011740NIEHS NIH HHS R21 ES011667
6 · The paper itself

Abstract

Previous molecular epidemiological studies on head and neck cancer have examined various single nucleotide polymorphisms (SNPs), but there are very few documented associations. In the International head and neck cancer epidemiology (INHANCE) consortium, we evaluated associations between SNPs in the metabolism, cell cycle, and DNA repair pathways and the risk of head and neck cancer. We analyzed individual-level pooled data from 14 European, North American, Central American, and Asia case-control studies (5,915 head and neck cancer cases and 10,644 controls) participating in the INHANCE consortium. Unconditional logistic regression was used to estimate odds ratios (OR) and 95% confidence intervals (CI) for SNP effects, adjusting for age, sex, race, and country. We observed an association between head and neck cancer risk and MGMT Leu84Phe heterozygotes (OR = 0.79, 95% CI = 0.68-0.93), XRCC1 Arg194Trp homozygotes Arg/Arg (OR = 2.3, 95% CI = 1.1-4.7), ADH1B Arg48His homozygotes Arg/Arg (OR = 2.7, 95% CI = 1.9-4.0), ADH1C Ile350Val homozygotes Ile/Ile (OR = 1.2, 95% CI = 1.1-1.4), and the GSTM1 null genotype (OR = 1.1, 95% CI = 1.0-1.2). Among these results, MGMT Leu84Phe, ADH1B Arg48His, ADH1C Ile350Arg, and the GSTM1 null genotype had fairly low false positive report probabilities (<20%). We observed associations between ADH1B Arg48His, ADH1C Ile350Arg, and GSTM1 null genotype and head and neck cancer risk. No functional study currently supports the observed association for MGMT Leu84Phe, and the association with XRCC1 Arg194Trp may be a chance finding.

Indexed as

head and neck cancerINHANCESNP

Identifiers

PMID22655231
PMCPMC3356135
OpenAlexW2000700552

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.