Evidence map›Paper›PMID 22654198›Full record

ArticleSleep2012

Short sleep as an environmental exposure: a preliminary study associating 5-HTTLPR genotype to self-reported sleep duration and depressed mood in first-year university students.

Mary A Carskadon, Katherine M Sharkey, Valerie S Knopik, John E McGeary

Open access · bronzeAbstract read
In one paragraph

Article in Sleep, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 47 citations in OpenAlex.

  1. Trial
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  6. Sleep Pattern Is Related to Mental Health among Chinese Collegiate Student Athletes.International journal of environmental research and public health · 2022
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  16. The impact of sleep duration on self-rated health.Sleep science (Sao Paulo, Brazil) · 2014
    Review
  17. Article
  18. Delayed sleep phase disorder in youth.Current opinion in psychiatry · 2013
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Mary A CarskadonDepartment of Psychiatry and Human Behavior, Alpert Medical School of Brown University, Providence, RI, USA. Mary_Carskadon@brown.edu
Katherine M Sharkey
Valerie S Knopik
John E McGeary
Rhode Island Hospital · USBradley Hospital · USBrown University · US

Funding

Prospective Study of Depressed Mood, Short Sleep and Serotonergic GenesR01MH079179 · NIMH · EMMA PENDLETON BRADLEY HOSPITAL · PI CARSKADON, MARY A · 2009 to 2013
$2.9M
Postpartum Depression: Role of Sleep & Genetic Risk in Postpartum Mood DisordersK23MH086689 · NIMH · RHODE ISLAND HOSPITAL · PI SHARKEY, KATHERINE M · 2011 to 2015
$831k
Brown University Shared DNA SequencerS10RR023457 · NCRR · BROWN UNIVERSITY · PI MCGEARY, JOHN E · 2008 to 2008
$147k
NCRR NIH HHS 1S10RR023457-01A1NCRR NIH HHS S10 RR023457NIMH NIH HHS K23 MH086689NIMH NIH HHS K23MH086689NIMH NIH HHS MH079179NIMH NIH HHS R01 MH079179
6 · The paper itself

Abstract

objectivesThis study examined whether the 5-HTTLPR polymorphism in the SLC6A4 gene is associated with self-reported symptoms of depressed mood in first-year university students with a persistent pattern of short sleep.

designStudents provided DNA samples and completed on-line sleep diaries and a mood scale during the first semester. A priori phenotypes for nocturnal sleep and mood scores were compared for the distribution of genotypes.

settingBrown University, Providence, Rhode Island.

participantsA sample of 135 first-year students, 54 male, 71 Caucasian, mean age 18.1 (± 0.5) yr.

interventionsNone. MEASUREMENTS: Students completed on-line sleep diaries daily across the first term (21-64 days; mean = 51 days ± 11) and Center for Epidemiologic Studies-Depression (CES-D) mood scale after 8 wk. DNA was genotyped for the triallelic 5-HTTLPR polymorphism. Low-expressing S and L(G)polymorphisms were designated S', and high-expressing L(A) was designated L'. Phenotype groups were identified from a combination of CES-D (median split: high > 12; low < 13) and mean nocturnal total sleep time (TST) from diaries: (shorter ≤ 7 hr; longer ≥ 7.5 hr). Three genotypes were identified (S'S', S'L', L'L'); the S'S' genotype was present in a higher proportion of Asian than non-Asian students.

resultsFOUR PHENOTYPE GROUPS WERE COMPARED: 40 students with shorter TST/high CES-D; 34 with shorter TST/low CES-D; 29 with longer TST/high CES-D; 32 with longer TST/low CES-D. Female:male distribution did not vary across phenotype groups (chi-square = 1.39; df = 3; P = 0.71). S'S' participants (n = 23) were overrepresented in the shorter TST/high CES-D group (chi- square = 15.04; df = 6; P < 0.02). This association was sustained after removing participants with preexisting evidence of depressed mood (chi-square = 12.90; df = 6; P = 0.045).

conclusionThese data indicate that young adults who reported shorter nocturnal sleep and higher depressed mood are more likely than others to carry a variant of the SLC6A4 gene associated with low expression of the serotonin transporter.

Indexed as

AdolescentDepressionFemaleGene-Environment InteractionGenetic Association StudiesGenotypeHumansMalePolymorphism, GeneticSerotonin Plasma Membrane Transport ProteinsSleepStudentsSerotonin Plasma Membrane Transport ProteinsSLC6A4 protein, human5-HTTLPRdepressiongeneticsserotoninSleepundergraduate students

Identifiers

PMID22654198
PMCPMC3353054
OpenAlexW2070666581

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.