Evidence map›Paper›PMID 22654107›Full record

ArticleThe Journal of biological chemistry2012

L-xylo-3-hexulose reductase is the missing link in the oxidoreductive pathway for D-galactose catabolism in filamentous fungi.

Dominik Mojzita, Silvia Herold, Benjamin Metz, Bernhard Seiboth, Peter Richard

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. The genome-scale sugar metabolic model fromCurrent research in microbial sciences · 2026
    Article
  3. L-Rhamnose Dehydrogenase LraA ofJournal of fungi (Basel, Switzerland) · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. The Sugar Metabolic Model ofJournal of fungi (Basel, Switzerland) · 2022
    Article
  11. Article
  12. Transcriptional Profiling ofFrontiers in microbiology · 2021
    Article
  13. The regulatory and transcriptional landscape associated with carbon utilization in a filamentous fungus.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  14. In silico evolution ofBiotechnology for biofuels · 2020
    Article
  15. Article
  16. Article
  17. The gold-standard genome ofStudies in mycology · 2018
    Article
  18. Alternative Substrate Metabolism inFrontiers in microbiology · 2018
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Dominik MojzitaVTT Technical Research Centre of Finland, Espoo, 02044 VTT, Finland.
Silvia Herold
Benjamin Metz
Bernhard Seiboth
Peter Richard
TU Wien · ATVTT Technical Research Centre of Finland · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In addition to the well established Leloir pathway for the catabolism of d-galactose in fungi, the oxidoreductive pathway has been recently identified. In this oxidoreductive pathway, D-galactose is converted via a series of NADPH-dependent reductions and NAD(+)-dependent oxidations into D-fructose. The pathway intermediates include galactitol, L-xylo-3-hexulose, and d-sorbitol. This study identified the missing link in the pathway, the L-xylo-3-hexulose reductase that catalyzes the conversion of L-xylo-3-hexulose to D-sorbitol. In Trichoderma reesei (Hypocrea jecorina) and Aspergillus niger, we identified the genes lxr4 and xhrA, respectively, that encode the l-xylo-3-hexulose reductases. The deletion of these genes resulted in no growth on galactitol and in reduced growth on D-galactose. The LXR4 was heterologously expressed, and the purified protein showed high specificity for L-xylo-3-hexulose with a K(m) = 2.0 ± 0.5 mm and a V(max) = 5.5 ± 1.0 units/mg. We also confirmed that the product of the LXR4 reaction is D-sorbitol.

Indexed as

Aspergillus nigerFungal ProteinsGalactoseGene DeletionGene Expression Regulation, FungalHexosesKetosesKineticsMetabolic Networks and PathwaysNADPOxidation-ReductionSorbitolSubstrate SpecificitySugar Alcohol DehydrogenasesTranscription, GeneticTrichodermaFungal ProteinsGalactoseHexosesKetosesNADPSorbitolSugar Alcohol Dehydrogenasesxylo-3-hexulose

Identifiers

PMID22654107
PMCPMC3406684
OpenAlexW1979186118

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.