Evidence map›Paper›PMID 22653887›Full record

ArticleJournal of biological rhythms2012

Cellular requirements for LARK in the Drosophila circadian system.

Vasudha Sundram, Fanny S Ng, Mary A Roberts, Carola Millán, John Ewer, F Rob Jackson

Open access · bronzeAbstract read
In one paragraph

Article in Journal of biological rhythms, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.1field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 25 citations in OpenAlex.

  1. Active zone plasticity couples sleep need to presynaptic hypophosphorylation.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  4. Roles for theJournal of biological rhythms · 2023
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  5. The circadian clock gatesProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  6. The impact of the gut microbiome on memory and sleep inThe Journal of experimental biology · 2021
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. The molecular ticks of the Drosophila circadian clock.Current opinion in insect science · 2015
    Article
  12. Article
  13. Article
  14. Brain proteomics of Anopheles gambiae.Omics : a journal of integrative biology · 2014
    Article
  15. Review
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Vasudha SundramDepartment of Neuroscience, Center for Neuroscience Research, Tufts University School of Medicine, Boston, MA 02111, USA.
Fanny S Ng
Mary A Roberts
Carola Millán
John Ewer
F Rob Jackson
Tufts University · USUniversity of Valparaíso · CL

Funding

TUSM/T-NEMC CENTER FOR NEUROSCIENCE RESEARCH - Imaging CoreP30NS047243 · NINDS · TUFTS UNIVERSITY BOSTON · PI JACKSON, F ROB · 2003 to 2017
$10.0M
Studies of a Neural Pacemaker Output PathwayR01HL059873 · NHLBI · TUFTS UNIVERSITY BOSTON · PI JACKSON, F ROB · 1997 to 2011
$3.9M
Glial Cell Regulation of Circadian BehaviorR01NS065900 · NINDS · TUFTS UNIVERSITY BOSTON · PI JACKSON, F ROB · 2010 to 2014
$1.8M
Physician & Scientist Training in Developmental GeneticsT32HD049341 · NICHD · TUFTS MEDICAL CENTER · PI BIANCHI, DIANA W. · 2006 to 2010
$1.4M
Circadian control of a behavorial outputR21NS053833 · NINDS · UNIVERSITY OF VALPARAISO · PI EWER, JOHN · 2006 to 2007
$323k
NHLBI NIH HHS R01 HL059873NHLBI NIH HHS R01 HL59873NICHD NIH HHS T32 HD049341NINDS NIH HHS NS065900NINDS NIH HHS P30 NS047243NINDS NIH HHS R01 NS065900NINDS NIH HHS R21 NS053833
6 · The paper itself

Abstract

RNA-binding proteins mediate posttranscriptional functions in the circadian systems of multiple species. A conserved RNA recognition motif (RRM) protein encoded by the lark gene is postulated to serve circadian output and molecular oscillator functions in Drosophila and mammals, respectively. In no species, however, has LARK been eliminated, in vivo, to determine the consequences for circadian timing. The present study utilized RNA interference (RNAi) techniques in Drosophila to decrease LARK levels in clock neurons and other cell types in order to evaluate the circadian functions of the protein. Knockdown of LARK in timeless (TIM)- or pigment dispersing factor (PDF)-containing clock cells caused a significant number of flies to exhibit arrhythmic locomotor activity, demonstrating a requirement for the protein in pacemaker cells. There was no obvious effect on PER protein cycling in lark interference (RNAi) flies, but a knockdown within the PDF neurons was associated with increased PDF immunoreactivity at the dorsal termini of the small ventral lateral neuronal (s-LNv) projections, suggesting an effect on neuropeptide release. The expression of lark RNAi in multiple neurosecretory cell populations demonstrated that LARK is required within pacemaker and nonpacemaker cells for the manifestation of normal locomotor activity rhythms. Interestingly, decreased LARK function in the prothoracic gland (PG), a peripheral organ containing a clock required for the circadian control of eclosion, was associated with weak population eclosion rhythms or arrhythmicity.

Indexed as

Circadian RhythmAnimalsAnimals, Genetically ModifiedDrosophila ProteinsFemaleGene Expression RegulationLocomotionMaleModels, BiologicalNeuronsPhenotypeRNA-Binding ProteinsRNA InterferenceRNA Processing, Post-TranscriptionalDrosophila ProteinsLark protein, DrosophilaRNA-Binding Proteinstim protein, Drosophila

Identifiers

PMID22653887
PMCPMC4135585
OpenAlexW2143832775

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.