Evidence map›Paper›PMID 22649538›Full record

ArticlePloS one2012

Development of cysteine-free fluorescent proteins for the oxidative environment.

Takahisa Suzuki, Seisuke Arai, Mayumi Takeuchi, Chiye Sakurai, Hideaki Ebana, Tsunehito Higashi, Hitoshi Hashimoto, Kiyotaka Hatsuzawa, Ikuo Wada

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 70 citations in OpenAlex.

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  12. Proceedings of the National Academy of Sciences of the United States of America · 2024
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  16. Red fluorescent proteins engineered from green fluorescent proteins.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  17. Nitric Oxide Sensing by a Blue Fluorescent Protein.Antioxidants (Basel, Switzerland) · 2022
    Article
  18. Calcimycin InhibitsACS infectious diseases · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Takahisa SuzukiDepartment of Cell Science, Institutes for Biomedical Sciences, Fukushima Medical University School of Medicine, Fukushima, Japan.
Seisuke Arai
Mayumi Takeuchi
Chiye Sakurai
Hideaki Ebana
Tsunehito Higashi
Hitoshi Hashimoto
Kiyotaka Hatsuzawa
Ikuo Wada
Fukushima Medical University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Molecular imaging employing fluorescent proteins has been widely used to highlight specific reactions or processes in various fields of the life sciences. Despite extensive improvements of the fluorescent tag, this technology is still limited in the study of molecular events in the extracellular milieu. This is partly due to the presence of cysteine in the fluorescent proteins. These proteins almost cotranslationally form disulfide bonded oligomers when expressed in the endoplasmic reticulum (ER). Although single molecule photobleaching analysis showed that these oligomers were not fluorescent, the fluorescent monomer form often showed aberrant behavior in folding and motion, particularly when fused to cysteine-containing cargo. Therefore we investigated whether it was possible to eliminate the cysteine without losing the brightness. By site-saturated mutagenesis, we found that the cysteine residues in fluorescent proteins could be replaced with specific alternatives while still retaining their brightness. cf(cysteine-free)SGFP2 showed significantly reduced restriction of free diffusion in the ER and marked improvement of maturation when fused to the prion protein. We further applied this approach to TagRFP family proteins and found a set of mutations that obtains the same level of brightness as the cysteine-containing proteins. The approach used in this study to generate new cysteine-free fluorescent tags should expand the application of molecular imaging to the extracellular milieu and facilitate its usage in medicine and biotechnology.

Indexed as

AnimalsCysteineEscherichia coliFluorescent DyesGreen Fluorescent ProteinsMiceMicroscopy, FluorescenceModels, BiologicalMutagenesis, Site-DirectedNIH 3T3 CellsPhotobleachingPlasmidsPrionsProtein EngineeringSequence Analysis, DNACysteineFluorescent DyesGreen Fluorescent ProteinsPrions

Identifiers

PMID22649538
PMCPMC3359384
OpenAlexW1995523554

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.