Evidence map›Paper›PMID 22645654›Full record

ArticleOpen biology2011

Opposing role of condensin hinge against replication protein A in mitosis and interphase through promoting DNA annealing.

Yuko Akai, Yumiko Kurokawa, Norihiko Nakazawa, Yuko Tonami-Murakami, Yuki Suzuki, Shige H Yoshimura, Hiroshi Iwasaki, Yoshiharu Shiroiwa, Takahiro Nakamura, Eri Shibata and 1 more

Abstract read
In one paragraph

Article in Open biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed.

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  19. Article
  20. Condensin action and compaction.Current genetics · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Yuko AkaiOkinawa Institute of Science and Technology Graduate University, Onna-son, Okinawa 904-0495, Japan.
Yumiko Kurokawa
Norihiko Nakazawa
Yuko Tonami-Murakami
Yuki Suzuki
Shige H Yoshimura
Hiroshi Iwasaki
Yoshiharu Shiroiwa
Takahiro Nakamura
Eri Shibata
Mitsuhiro Yanagida

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Condensin is required for chromosome dynamics and diverse DNA metabolism. How condensin works, however, is not well understood. Condensin contains two structural maintenance of chromosomes (SMC) subunits with the terminal globular domains connected to coiled-coil that is interrupted by the central hinge. Heterotrimeric non-SMC subunits regulate SMC. We identified a novel fission yeast SMC hinge mutant, cut14-Y1, which displayed defects in DNA damage repair and chromosome segregation. It contains an amino acid substitution at a conserved hinge residue of Cut14/SMC2, resulting in diminished DNA binding and annealing. A replication protein A mutant, ssb1-418, greatly alleviated the repair and mitotic defects of cut14-Y1. Ssb1 protein formed nucleolar foci in cut14-Y1 cells, but the number of foci was diminished in cut14-Y1 ssb1-418 double mutants. Consistent with the above results, Ssb1 protein bound to single-strand DNA was removed by condensin or the SMC dimer through DNA reannealing in vitro. Similarly, RNA hybridized to DNA may be removed by the SMC dimer. Thus, condensin may wind up DNA strands to unload chromosomal components after DNA repair and prior to mitosis. We show that 16 suppressor mutations of cut14-Y1 were all mapped within the hinge domain, which surrounded the original L543 mutation site.

Indexed as

Adenosine TriphosphatasesAmino Acid SequenceAmino Acid SubstitutionChromosome MappingChromosomes, FungalDNA-Binding ProteinsDNA DamageDNA, FungalDNA RepairGenes, FungalInterphaseMitosisModels, MolecularMolecular Sequence DataMultiprotein ComplexesMutationAdenosine Triphosphatasescondensin complexescut14 protein, S pombeDNA-Binding ProteinsDNA, FungalMultiprotein ComplexesReplication Protein ASchizosaccharomyces pombe ProteinsSSB1 protein, S pombestructural maintenance of chromosomes, DNA damage, mitosis, DNA metabolism, condensation

Identifiers

PMID22645654
PMCPMC3352087

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.