ArticleFrontiers in plant science2011
The iPlant Collaborative: Cyberinfrastructure for Plant Biology.
Article in Frontiers in plant science, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 182 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
182 citing papers in PubMed.
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- Agricultural landscape genomics to increase crop resilience.Plant communications · 2025Review
- CyVerse: Cyberinfrastructure for open science.PLoS computational biology · 2024Article
- Gene function annotations for the maize NAM founder lines.BMC research notes · 2024Article
- Horn fly transcriptome data of ten populations from the southern United States with varying degrees and molecular mechanisms of pesticide resistance.Data in brief · 2023Article
- Altered expression of SELF-PRUNING disrupts homeostasis and facilitates signal delivery to meristems.Plant physiology · 2023Article
- The Allele Catalog Tool: a web-based interactive tool for allele discovery and analysis.BMC genomics · 2023Article
- Depth-driven patterns in lytic viral diversity, auxiliary metabolic gene content, and productivity in offshore oligotrophic waters.Frontiers in microbiology · 2023Article
- PhytoOracle: Scalable, modular phenomics data processing pipelines.Frontiers in plant science · 2023Article
- Genomic Variations Explorer (GenVarX): a toolset for annotating promoter and CNV regions using genotypic and phenotypic differences.Frontiers in genetics · 2023Article
- Article
- Using the Collaborative Cross and Diversity Outbred Mice in Immunology.Current protocols · 2022Article
- Leaf cell-specific and single-cell transcriptional profiling reveals a role for the palisade layer in UV light protection.The Plant cell · 2022Article
- Diversifying the genomic data science research community.Genome research · 2022Review
- Prevalence of an Insect-Associated Genomic Region in Environmentally AcquiredApplied and environmental microbiology · 2022Article
- Providing Scale to a Known Taxonomic Unknown-At Least a 70-Fold Increase in Species Diversity in a Cosmopolitan Nominal Taxon of Lichen-Forming Fungi.Journal of fungi (Basel, Switzerland) · 2022Article
- Effects of 'Candidatus Liberibacter solanacearum' haplotypes A and B on tomato gene expression and geotropism.BMC plant biology · 2022Article
- BioVizFrontiers in bioinformatics · 2022Article
- CyVerse for Reproducible Research: RNA-Seq Analysis.Methods in molecular biology (Clifton, N.J.) · 2022Article
122 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
65 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The iPlant Collaborative (iPlant) is a United States National Science Foundation (NSF) funded project that aims to create an innovative, comprehensive, and foundational cyberinfrastructure in support of plant biology research (PSCIC, 2006). iPlant is developing cyberinfrastructure that uniquely enables scientists throughout the diverse fields that comprise plant biology to address Grand Challenges in new ways, to stimulate and facilitate cross-disciplinary research, to promote biology and computer science research interactions, and to train the next generation of scientists on the use of cyberinfrastructure in research and education. Meeting humanity's projected demands for agricultural and forest products and the expectation that natural ecosystems be managed sustainably will require synergies from the application of information technologies. The iPlant cyberinfrastructure design is based on an unprecedented period of research community input, and leverages developments in high-performance computing, data storage, and cyberinfrastructure for the physical sciences. iPlant is an open-source project with application programming interfaces that allow the community to extend the infrastructure to meet its needs. iPlant is sponsoring community-driven workshops addressing specific scientific questions via analysis tool integration and hypothesis testing. These workshops teach researchers how to add bioinformatics tools and/or datasets into the iPlant cyberinfrastructure enabling plant scientists to perform complex analyses on large datasets without the need to master the command-line or high-performance computational services.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.