Evidence map›Paper›PMID 22645276›Full record

ArticleHuman molecular genetics2012

ATOH7 mutations cause autosomal recessive persistent hyperplasia of the primary vitreous.

Lev Prasov, Tehmina Masud, Shagufta Khaliq, S Qasim Mehdi, Aiysha Abid, Edward R Oliver, Eduardo D Silva, Amy Lewanda, Michael C Brodsky, Mark Borchert and 4 more

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in Human molecular genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 77 citations in OpenAlex.

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  15. Mechanistic Insights into Axenfeld-Rieger Syndrome from ZebrafishInternational journal of molecular sciences · 2021
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  19. Review
  20. TheProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 9 institutions in 4 countries.

Lev PrasovDepartment of Human Genetics, University of Michigan, Ann Arbor, MI 48109, USA.
Tehmina Masud
Shagufta Khaliq
S Qasim Mehdi
Aiysha Abid
Edward R Oliver
Eduardo D Silva
Amy Lewanda
Michael C Brodsky
Mark Borchert
Daniel Kelberman
Jane C Sowden
Mehul T Dattani
Tom Glaser
University College London · GBUniversity of Michigan–Ann Arbor · USSindh Institute of Urology and Transplantation · PKChildren's Hospital of Los Angeles · USHospital of the University of Pennsylvania · USInova Children's Hospital · USMayo Clinic in Arizona · USUniversity of Coimbra · PTUniversity of Health Sciences Lahore · PK

Funding

MICHIGAN MEDICAL SCIENTIST TRAINING PROGRAMT32GM007863 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI COLLINS, KATHLEEN L. · 1985 to 2024
$38.3M
Vision Research Training Program - T32EY013934T32EY013934 · NEI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Patrice Elie Fort · 2002 to 2026
$4.2M
Genetic Basis of Congenital AnophthalmiaR01EY019497 · NEI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GLASER, THOMAS M. · 2009 to 2020
$3.3M
Genetic Analysis of Retinal Ganglion Cell Function, Development and DiseaseR01EY014259 · NEI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GLASER, THOMAS M. · 2002 to 2013
$2.8M
NEI NIH HHS EY14259NEI NIH HHS EY19497NEI NIH HHS T32 EY13934NIGMS NIH HHS GM07863
6 · The paper itself

Abstract

The vertebrate basic helix-loop-helix (bHLH) transcription factor ATOH7 (Math5) is specifically expressed in the embryonic neural retina and is required for the genesis of retinal ganglion cells (RGCs) and optic nerves. In Atoh7 mutant mice, the absence of trophic factors secreted by RGCs prevents the development of the intrinsic retinal vasculature and the regression of fetal blood vessels, causing persistent hyperplasia of the primary vitreous (PHPV). We therefore screened patients with hereditary PHPV, as well as bilateral optic nerve aplasia (ONA) or hypoplasia (ONH), for mutations in ATOH7. We identified a homozygous ATOH7 mutation (N46H) in a large family with an autosomal recessive PHPV disease trait linked to 10q21, and a heterozygous variant (R65G, p.Arg65Gly) in one of five sporadic ONA patients. High-density single-nucleotide polymorphism analysis also revealed a CNTN4 duplication and an OTX2 deletion in the ONA cohort. Functional analysis of ATOH7 bHLH domain substitutions, by electrophoretic mobility shift and luciferase cotransfection assays, revealed that the N46H variant cannot bind DNA or activate transcription, consistent with structural modeling. The N46H variant also failed to rescue RGC development in mouse Atoh7-/- retinal explants. The R65G variant retains all of these activities, similar to wild-type human ATOH7. Our results strongly suggest that autosomal recessive persistent hyperplastic primary vitreous is caused by N46H and is etiologically related to nonsyndromic congenital retinal nonattachment. The R65G allele, however, cannot explain the ONA phenotype. Our study firmly establishes ATOH7 as a retinal disease gene and provides a functional basis to analyze new coding variants.

Indexed as

AnimalsBase SequenceBasic Helix-Loop-Helix ProteinsChromosomes, Human, Pair 10FemaleGenes, RecessiveHelix-Loop-Helix MotifsHumansHyperplasiaInfantMiceMice, Mutant StrainsMolecular Sequence DataMutationNerve Tissue ProteinsOptic NerveATOH7 protein, humanAtoh7 protein, mouseBasic Helix-Loop-Helix ProteinsNerve Tissue Proteins

Identifiers

PMID22645276
PMCPMC3406761
OpenAlexW2142526160

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.