Evidence map›Paper›PMID 22641034›Full record

ArticleFEBS letters2012

Structural recognition mechanisms between human Src homology domain 3 (SH3) and ALG-2-interacting protein X (Alix).

Xiaoli Shi, Stephane Betzi, Adrien Lugari, Sandrine Opi, Audrey Restouin, Isabelle Parrot, Jean Martinez, Pascale Zimmermann, Patrick Lecine, Mingdong Huang and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in FEBS letters, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 3 countries.

Xiaoli ShiCNRS UMR 7258, INSERM U 1068, Centre de Recherche en Cancérologie de Marseille, Marseille F-13009, France.
Stephane Betzi
Adrien Lugari
Sandrine Opi
Audrey Restouin
Isabelle Parrot
Jean Martinez
Pascale Zimmermann
Patrick Lecine
Mingdong Huang
Stefan T Arold
Yves Collette
Xavier Morelli
Centre National de la Recherche Scientifique · FRAix-Marseille Université · FRInstitut Paoli-Calmettes · FRCentre de Recherche en Cancérologie de Marseille · FRChinese Academy of Sciences · CNInstitut Pprime · FRThe University of Texas MD Anderson Cancer Center · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
NCI NIH HHS CA016672NCI NIH HHS P30 CA016672
6 · The paper itself

Abstract

The functions of Src family kinases are tightly regulated through Src homology (SH) domain-mediated protein-protein interactions. We previously reported the biophysical characteristics of the apoptosis-linked gene 2-interacting protein X (Alix) in complex with the haemopoietic cell kinase (Hck) SH3 domain. In the current study, we have combined ITC, NMR, SAXS and molecular modeling to determine a 3D model of the complex. We demonstrate that Hck SH3 recognizes an extended linear proline-rich region of Alix. This particular binding mode enables Hck SH3 to sense a specific non-canonical residue situated in the SH3 RT-loop of the kinase. The resulting model helps clarify the mechanistic insights of Alix-Hck interaction.

Indexed as

src Homology DomainsBinding SitesCalcium-Binding ProteinsCell Cycle ProteinsEndosomal Sorting Complexes Required for TransportHumansModels, Molecularnef Gene Products, Human Immunodeficiency VirusNuclear Magnetic Resonance, BiomolecularProlineProtein ConformationProto-Oncogene Proteins c-hckScattering, Small AngleCalcium-Binding ProteinsCell Cycle ProteinsEndosomal Sorting Complexes Required for TransportHCK protein, humannef Gene Products, Human Immunodeficiency VirusPDCD6IP protein, humanProlineProto-Oncogene Proteins c-hck

Identifiers

PMID22641034
PMCPMC3378324
OpenAlexW2054442912

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.