Evidence map›Paper›PMID 22637734›Full record

ArticleCarcinogenesis2012

Identification of five novel modifier loci of Apc(Min) harbored in the BXH14 recombinant inbred strain.

Stephanie C Nnadi, Rayneisha Watson, Julie Innocent, Gregory E Gonye, Arthur M Buchberg, Linda D Siracusa

Open access · bronzeAbstract read
In one paragraph

Article in Carcinogenesis, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Colitis-associated colon cancer: Is it in your genes?World journal of gastroenterology · 2015
    Review
  6. Genetic dissection of the Mom5 modifier locus and evaluation of Mom5 candidate genes.Mammalian genome : official journal of the International Mammalian Genome Society · 2015
    Article
  7. Article
  8. Article
  9. Mouse models for colorectal cancer.American journal of cancer research · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Stephanie C NnadiDepartment of Microbiology and Immunology, Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, PA 19107-5541, USA.
Rayneisha Watson
Julie Innocent
Gregory E Gonye
Arthur M Buchberg
Linda D Siracusa
Thomas Jefferson University · US

Funding

RELEVANCE OF GENOMIC ALTERATIONS IN COLORECTAL CANCERP01CA072027 · NCI · THOMAS JEFFERSON UNIVERSITY · PI CURRAN, WALTER JOHN · 2000 to 2004
$5.8M
Molecular Genetics of Cancer SusceptibilityR01CA089560 · NCI · THOMAS JEFFERSON UNIVERSITY · PI SIRACUSA, LINDA D · 2003 to 2007
$1.8M
Susceptibility Genes and Colorectal CancerR01CA120243 · NCI · THOMAS JEFFERSON UNIVERSITY · PI SIRACUSA, LINDA D · 2007 to 2011
$1.5M
A Novel Modifier Locus Suppressing ApcMin Intestinal PolyposisF31CA134181 · NCI · THOMAS JEFFERSON UNIVERSITY · PI NNADI, STEPHANIE · 2008 to 2009
$73k
NCI NIH HHS CA120243NCI NIH HHS CA72027NCI NIH HHS CA89560NCI NIH HHS F31 CA134181NCI NIH HHS F31CA134181-02NCI NIH HHS P01 CA072027NCI NIH HHS R01 CA089560NCI NIH HHS R01 CA120243
6 · The paper itself

Abstract

Every year thousands of people in the USA are diagnosed with small intestine and colorectal cancers (CRC). Although environmental factors affect disease etiology, uncovering underlying genetic factors is imperative for risk assessment and developing preventative therapies. Familial adenomatous polyposis is a heritable genetic disorder in which individuals carry germ-line mutations in the adenomatous polyposis coli (APC) gene that predisposes them to CRC. The Apc ( Min ) mouse model carries a point mutation in the Apc gene and develops polyps along the intestinal tract. Inbred strain background influences polyp phenotypes in Apc ( Min ) mice. Several Modifier of Min (Mom) loci that alter tumor phenotypes associated with the Apc ( Min ) mutation have been identified to date. We screened BXH recombinant inbred (RI) strains by crossing BXH RI females with C57BL/6J (B6) Apc ( Min ) males and quantitating tumor phenotypes in backcross progeny. We found that the BXH14 RI strain harbors five modifier loci that decrease polyp multiplicity. Furthermore, we show that resistance is determined by varying combinations of these modifier loci. Gene interaction network analysis shows that there are multiple networks with proven gene-gene interactions, which contain genes from all five modifier loci. We discuss the implications of this result for studies that define susceptibility loci, namely that multiple networks may be acting concurrently to alter tumor phenotypes. Thus, the significance of this work resides not only with the modifier loci we identified but also with the combinations of loci needed to get maximal protection against polyposis and the impact of this finding on human disease studies.

Indexed as

Genes, APCAnimalsColonFemaleGerm-Line MutationIntestinal PolypsIntestine, SmallMaleMiceMice, Inbred Strains

Identifiers

PMID22637734
PMCPMC3499057
OpenAlexW2134304347

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.