Evidence map›Paper›PMID 22636769›Full record

ArticleJournal of bacteriology2012

Enterococcus faecalis PrgJ, a VirB4-like ATPase, mediates pCF10 conjugative transfer through substrate binding.

Feng Li, Cristina Alvarez-Martinez, Yuqing Chen, Kyoung-Jae Choi, Hye-Jeong Yeo, Peter J Christie

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 50 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Proteomic Characterization of Virulence Factors and Related Proteins inInternational journal of molecular sciences · 2022
    Article
  7. Article
  8. Review
  9. Review
  10. Enterococcal Genetics.Microbiology spectrum · 2019
    Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. The Agrobacterium Ti Plasmids.Microbiology spectrum · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Feng LiDepartment of Microbiology and Molecular Genetics, University of Texas Medical School at Houston, Houston, Texas, USA.
Cristina Alvarez-Martinez
Yuqing Chen
Kyoung-Jae Choi
Hye-Jeong Yeo
Peter J Christie
The University of Texas Health Science Center at Houston · USUniversity of Houston · USUniversidade de São Paulo · BR

Funding

TRANSLOCATION OF DNA ACROSS THE AGROBACTERIUM ENVELOPER01GM048746 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI CHRISTIE, PETER J. · 1998 to 2018
$6.9M
PDGF ACTIVATION OF NF-KB FACTOR IN FIBROBLASTSR01GM048476 · NIGMS · VANDERBILT UNIVERSITY · PI OLASHAW, NANCY E · 1993 to 1997
–
NIGMS NIH HHS GM48476NIGMS NIH HHS R01 GM048746
6 · The paper itself

Abstract

The Enterococcus faecalis prg and pcf genes of plasmid pCF10 encode a type IV secretion system (T4SS) required for conjugative transfer. PrgJ is a member of the VirB4 family of ATPases that are universally associated with T4SSs. Here, we report that purified PrgJ dimers displayed ATP binding and hydrolysis activities. A PrgJ nucleoside triphosphate (NTP) binding site mutation (K471E) slightly diminished ATP binding but abolished ATP hydrolysis in vitro and blocked pCF10 transfer in vivo. As shown with affinity pulldown assays, PrgJ and the K471E mutant protein interacted with the substrate receptor PcfC and with relaxase PcfG and accessory factor PcfF, which together form the relaxosome at the oriT sequence to initiate plasmid processing. The purified PrgJ and K471E proteins also bound single- and double-stranded DNA substrates without sequence specificity in vitro, and both PrgJ derivatives bound pCF10 in vivo by a mechanism dependent on an intact oriT sequence and cosynthesis of PcfC, PcfF, and PcfG, as shown by a formaldehyde-cross-linking assay. Our findings support a model in which the PcfC receptor coordinates with the PrgJ ATPase to drive early steps of pCF10 processing/transfer: (i) PcfC first binds the pCF10 relaxosome through contacts with PcfF, PcfG, and DNA; (ii) PcfC delivers the plasmid substrate to PrgJ; and (iii) PrgJ catalyzes substrate transfer to the membrane translocase. Substrate engagement with a VirB4-like subunit has not been previously described; consequently, our studies point to a novel function for these signature T4SS ATPases in mediating early steps of type IV secretion.

Indexed as

Conjugation, GeneticGene Transfer, HorizontalPlasmidsAdenosine TriphosphatasesAdenosine TriphosphateAmino Acid SubstitutionBacterial Secretion SystemsDNAEnterococcus faecalisHydrolysisModels, BiologicalMutant ProteinsMutation, MissenseProtein BindingProtein Interaction MappingProtein MultimerizationAdenosine TriphosphatasesAdenosine TriphosphateBacterial Secretion SystemsDNAMutant Proteins

Identifiers

PMID22636769
PMCPMC3416518
OpenAlexW2089460355

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.