Evidence map›Paper›PMID 22635112›Full record

ArticlePlant physiology2012

Systems dynamic modeling of the stomatal guard cell predicts emergent behaviors in transport, signaling, and volume control.

Zhong-Hua Chen, Adrian Hills, Ulrike Bätz, Anna Amtmann, Virgilio L Lew, Michael R Blatt

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 97 papers.

0numbers the graph read from it
0cells of the map it votes in
97citing papers in PubMed
15.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

97 citing papers in PubMed, 174 citations in OpenAlex.

  1. Review
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  15. Prolonged Post-Harvest Preservation in Lettuce (Plants (Basel, Switzerland) · 2024
    Article
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  20. Engineering a KNature plants · 2022
    Article

37 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Zhong-Hua ChenLaboratory of Plant Physiology and Biophysics, University of Glasgow, Glasgow G12 8QQ, United Kingdom.
Adrian Hills
Ulrike Bätz
Anna Amtmann
Virgilio L Lew
Michael R Blatt
University of Glasgow · GBUniversity of Cambridge · GB

Funding

Biotechnology and Biological Sciences Research Council BB/F001630/1Biotechnology and Biological Sciences Research Council BB/F001673/1Biotechnology and Biological Sciences Research Council BB/H009817/1Biotechnology and Biological Sciences Research Council BB/H024867/1Biotechnology and Biological Sciences Research Council P12750
6 · The paper itself

Abstract

The dynamics of stomatal movements and their consequences for photosynthesis and transpirational water loss have long been incorporated into mathematical models, but none have been developed from the bottom up that are widely applicable in predicting stomatal behavior at a cellular level. We previously established a systems dynamic model incorporating explicitly the wealth of biophysical and kinetic knowledge available for guard cell transport, signaling, and homeostasis. Here we describe the behavior of the model in response to experimentally documented changes in primary pump activities and malate (Mal) synthesis imposed over a diurnal cycle. We show that the model successfully recapitulates the cyclic variations in H⁺, K⁺, Cl⁻, and Mal concentrations in the cytosol and vacuole known for guard cells. It also yields a number of unexpected and counterintuitive outputs. Among these, we report a diurnal elevation in cytosolic-free Ca²⁺ concentration and an exchange of vacuolar Cl⁻ with Mal, both of which find substantiation in the literature but had previously been suggested to require additional and complex levels of regulation. These findings highlight the true predictive power of the OnGuard model in providing a framework for systems analysis of stomatal guard cells, and they demonstrate the utility of the OnGuard software and HoTSig library in exploring fundamental problems in cellular physiology and homeostasis.

Indexed as

Models, BiologicalSignal TransductionSystems BiologyBiological TransportCalcium SignalingCell MembraneChloridesCircadian RhythmCytosolEnergy MetabolismHydrogen-Ion ConcentrationIntracellular MembranesMalatesOsmosisPlant StomataPotassiumChloridesMalatesmalic acidPotassiumProtonsProton-Translocating ATPasesSucrose

Identifiers

PMID22635112
PMCPMC3404696
OpenAlexW2035680967

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.