ArticlePloS one2012
Genome and transcriptome analysis of the food-yeast Candida utilis.
Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
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Who cites it
14 citing papers in PubMed, 33 citations in OpenAlex.
- Advantages of Mutant Generation by Genome Rearrangements of Non-Conventional Yeast via Direct Nuclease Transfection.Genes to cells : devoted to molecular & cellular mechanisms · 2025Article
- Native and Recombinant Yeast Producers of Lactic Acid: Characteristics and Perspectives.International journal of molecular sciences · 2025Review
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- Magnesium Binding byMicroorganisms · 2023Article
- An integrated transcriptomic and metabolic phenotype analysis to uncover the metabolic characteristics of a genetically engineeredFrontiers in microbiology · 2023Article
- TAQing2.0 for genome reorganization of asexual industrial yeasts by direct protein transfection.Communications biology · 2022Article
- Bacterial and fungal communities of traditional fermented Chinese soybean paste (Doujiang) and their properties.Food science & nutrition · 2021Article
- Expanding the Knowledge on the Skillful YeastJournal of fungi (Basel, Switzerland) · 2021Review
- The ploidy determination of the biotechnologically important yeast Candida utilis.Journal of applied genetics · 2020Article
- Production and characterization of yeasts grown on media composed of spruce-derived sugars and protein hydrolysates from chicken by-products.Microbial cell factories · 2020Article
- The expression of glycerol facilitators from various yeast species improves growth on glycerol ofMetabolic engineering communications · 2016Article
- Oral Tolerance Induction in Experimental Autoimmune Encephalomyelitis with Candida utilis Expressing the Immunogenic MOG35-55 Peptide.PloS one · 2016Article
- Genomics and the making of yeast biodiversity.Current opinion in genetics & development · 2015Review
- Clade- and species-specific features of genome evolution in the Saccharomycetaceae.FEMS yeast research · 2015Article
Corrections and comments
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Authors and funding
5 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The industrially important food-yeast Candida utilis is a Crabtree effect-negative yeast used to produce valuable chemicals and recombinant proteins. In the present study, we conducted whole genome sequencing and phylogenetic analysis of C. utilis, which showed that this yeast diverged long before the formation of the CUG and Saccharomyces/Kluyveromyces clades. In addition, we performed comparative genome and transcriptome analyses using next-generation sequencing, which resulted in the identification of genes important for characteristic phenotypes of C. utilis such as those involved in nitrate assimilation, in addition to the gene encoding the functional hexose transporter. We also found that an antisense transcript of the alcohol dehydrogenase gene, which in silico analysis did not predict to be a functional gene, was transcribed in the stationary-phase, suggesting a novel system of repression of ethanol production. These findings should facilitate the development of more sophisticated systems for the production of useful reagents using C. utilis.
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