Evidence map›Paper›PMID 22628498›Full record

ArticleJournal of bacteriology2012

The genome of plant growth-promoting Bacillus amyloliquefaciens subsp. plantarum strain YAU B9601-Y2 contains a gene cluster for mersacidin synthesis.

Kun Hao, Pengfei He, Jochen Blom, Christian Rueckert, Zichao Mao, Yixin Wu, Yueqiu He, Rainer Borriss

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
6.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 46 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Kun HaoFaculty of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, People's Republic of China.
Pengfei He
Jochen Blom
Christian Rueckert
Zichao Mao
Yixin Wu
Yueqiu He
Rainer Borriss
Yunnan Agricultural University · CNBielefeld University · DEHuazhong Agricultural University · CNHumboldt-Universität zu Berlin · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genome of rhizobacterium Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2 was 4.24 Mb in size and harbored 3,991 coding sequences (CDS). Giant gene clusters were dedicated to nonribosomal synthesis of antimicrobial lipopeptides and polyketides. Remarkably, CAU B946 possessed a gene cluster involved in synthesis of mersacidin.

Indexed as

Genome, BacterialAnti-Infective AgentsBacillusBacteriocinsBiosynthetic PathwaysDNA, BacterialLipopeptidesMolecular Sequence DataMultigene FamilyPeptidesPlantsPolyketidesSequence Analysis, DNAAnti-Infective AgentsBacteriocinsDNA, BacterialLipopeptidesmersacidinPeptidesPolyketides

Identifiers

PMID22628498
PMCPMC3370840
OpenAlexW2064319107

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.