Evidence map›Paper›PMID 22623228›Full record

ArticleProteomics2012

Identification of C(6) -ceramide-interacting proteins in D6P2T Schwannoma cells.

Venkatesh Kota, Zdzislaw M Szulc, Hiroko Hama

Abstract read
In one paragraph

Article in Proteomics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Ceramide launches an acute anti-adhesion pro-migration cell signaling program in response to chemotherapy.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2020
    Article
  6. Review
  7. Article
  8. Visualizing bioactive ceramides.Chemistry and physics of lipids · 2018
    Review
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Venkatesh KotaDepartment of Biochemistry and Molecular Biology, Medical University of South Carolina, Charleston,, SC, USA.
Zdzislaw M Szulc
Hiroko Hama
Medical University of South Carolina · US

Funding

THE ROLE OF LACTOSYLCERAMIDE IN RENAL AGING AND DISEASEP20RR017677 · NCRR · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI CROSSON, CRAIG E. · 2002 to 2011
$23.4M
Lipid hydroxylation in glial cell signaling and myelinationR01NS060807 · NINDS · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI HAMA, HIROKO · 2008 to 2012
$1.6M
NCRR NIH HHS P20 RR017677NINDS NIH HHS NS060807NINDS NIH HHS R01 NS060807
6 · The paper itself

Abstract

Ceramide is a bioactive molecule involved in numerous cell signaling pathways that are associated with cell cycle control, differentiation, senescence, and apoptosis. Although substantial knowledge about ceramide-regulated pathways has accumulated in the past decade, molecular mechanisms of ceramide action remain poorly understood, primarily due to limited information about ceramide-binding proteins. In the present study, we used affinity purification with a synthetic biotin-conjugated C(6) -ceramide analogue and LC-MS/MS to identify potential ceramide-interacting proteins in D6P2T Schwannoma cells. The purification resulted in identification of 97 unique proteins. The identified proteins are involved in various cellular processes, including apoptosis, cellular stress, cell cycle, cell differentiation, signaling, transcription, translation, protein biogenesis, metabolism, and transport.

Indexed as

AnimalsApoptosisCell Cycle CheckpointsCell Line, TumorCeramidesChromatography, LiquidNeurilemmomaProteinsSignal TransductionTandem Mass SpectrometryCeramidesN-(alpha-hydroxyoctadecanoyl)phytosphingosineProteins

Identifiers

PMID22623228
PMCPMC3837549
OpenAlexW2164498944

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.