ArticlePlanta2012
Transcriptional profiling of genes involved in embryogenic, non-embryogenic calluses and somatic embryogenesis of Valencia sweet orange by SSH-based microarray.
Article in Planta, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
18 citing papers in PubMed, 60 citations in OpenAlex.
- CitRWP directly activates CsDAZ3 to promote somatic embryogenesis in Citrus.The New phytologist · 2026Article
- De novo transcriptome analysis of somatic embryogenesis induced by plant hormones combined with adenosine 5-monophosphate and nicotinamide adenine dinucleotide molecules in Aspilia africana (Pers.) C.D.Adams.Journal, genetic engineering & biotechnology · 2026Article
- Apoplastic and Symplasmic Markers of Somatic Embryogenesis.Plants (Basel, Switzerland) · 2023Review
- Molecular and histological validation of modifiedFrontiers in plant science · 2023Article
- miR171 modulates induction of somatic embryogenesis in citrus callus.Plant cell reports · 2022Article
- Transcriptome analysis identifies genes involved in the somatic embryogenesis of Eucalyptus.BMC genomics · 2020Article
- Genes, proteins and other networks regulating somatic embryogenesis in plants.Journal, genetic engineering & biotechnology · 2020Review
- Genome-wide analysis of the citrus B3 superfamily and their association with somatic embryogenesis.BMC genomics · 2020Article
- Somatic Embryogenesis Induction in Woody Species: The Future After OMICs Data Assessment.Frontiers in plant science · 2019Review
- Article
- MITE insertion-dependent expression of CitRKD1 with a RWP-RK domain regulates somatic embryogenesis in citrus nucellar tissues.BMC plant biology · 2018Article
- miR156-SPL modules regulate induction of somatic embryogenesis in citrus callus.Journal of experimental botany · 2018Article
- Article
- Genome-scale mRNA and small RNA transcriptomic insights into initiation of citrus apomixis.Journal of experimental botany · 2016Article
- Transcriptional identification and characterization of differentially expressed genes associated with embryogenesis in radish (Raphanus sativus L.).Scientific reports · 2016Article
- De novo comparative transcriptome analysis provides new insights into sucrose induced somatic embryogenesis in camphor tree (Cinnamomum camphora L.).BMC genomics · 2016Article
- Transition from somatic embryo to friable embryogenic callus in cassava: dynamic changes in cellular structure, physiological status, and gene expression profiles.Frontiers in plant science · 2015Article
- Transcriptome profiling and comparative analysis of Panax ginseng adventitious roots.Journal of ginseng research · 2014Article
Corrections and comments
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Authors and funding
6 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Somatic embryogenesis (SE) is a most promising technology that is used for in vitro germplasm conservation and genetic improvement via biotechnological approaches in citrus. Herein, three suppression subtractive hybridization (SSH) libraries were constructed using calluses of Citrus sinensis cv. 'Valencia' to explore the molecular mechanisms that underlie the SE in citrus. A total of 880 unisequences were identified by microarray screening based on these three SSH libraries. Gene ontology analysis of the differentially expressed genes indicated that nucleolus associated regulation and biogenesis processes, hormone signal transduction, and stress factors might be involved in SE. Transcription factors might also play an important role. LEC1/B3 domain regulatory network genes (LEC1, L1L, FUS3, ABI3, and ABI5) were isolated in citrus SE. Some new transcription factors associated with citrus SE, like a B3 domain containing gene and HB4, were identified. To understand the influence of these isolated genes on SE competence, their expression profiles were compared among callus lines of seven citrus cultivars with different SE competence. The expression dynamics suggested that these genes could be necessary for the SE initiation and might play a role in embryogenic competence maintenance in different cultivars. On the basis of gene expression profiles, an overview of major physiological and biosynthesis processes at different developmental stages during citrus SE is presented. For the first time, these data provide a global resource for transcriptional events important for SE in citrus, and the specific genes offer new information for further investigation on citrus SE maintenance and development.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.