Evidence map›Paper›PMID 22621902›Full record

ArticleMolecular biology of the cell2012

Chromatin remodeling by the SWI/SNF complex is essential for transcription mediated by the yeast cell wall integrity MAPK pathway.

A Belén Sanz, Raúl García, Jose Manuel Rodríguez-Peña, Sonia Díez-Muñiz, César Nombela, Craig L Peterson, Javier Arroyo

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 61 citations in OpenAlex.

  1. Sus1 Modulates Chromatin Remodeling and Gene Expression via the Cell Wall Integrity Pathway in Saccharomyces cerevisiae.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
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  7. Structural diversification of fungal cell wall in response to the stress signaling and remodeling during fungal pathogenesis.Physiology and molecular biology of plants : an international journal of functional plant biology · 2024
    Review
  8. Article
  9. Article
  10. Article
  11. Control of Gene Expression via the Yeast CWI Pathway.International journal of molecular sciences · 2022
    Review
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  13. Review
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  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

A Belén SanzDepartamento de Microbiología II, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid, Spain.
Raúl García
Jose Manuel Rodríguez-Peña
Sonia Díez-Muñiz
César Nombela
Craig L Peterson
Javier Arroyo
Universidad Complutense de Madrid · ESUniversity of Massachusetts Chan Medical School · US

Funding

Analysis of the yeast SWI1, SWI2, and SWI3 proteinsR37GM049650 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI PETERSON, CRAIG L · 2006 to 2015
$4.9M
YEAST SWI1, SWI2, AND SWI3 PROTEINSR01GM049650 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI PETERSON, CRAIG L · 1993 to 2016
$2.6M
NIGMS NIH HHS GM49650NIGMS NIH HHS R01 GM049650NIGMS NIH HHS R37 GM049650
6 · The paper itself

Abstract

In Saccharomyces cerevisiae, the transcriptional program triggered by cell wall stress is coordinated by Slt2/Mpk1, the mitogen-activated protein kinase (MAPK) of the cell wall integrity (CWI) pathway, and is mostly mediated by the transcription factor Rlm1. Here we show that the SWI/SNF chromatin-remodeling complex plays a critical role in orchestrating the transcriptional response regulated by Rlm1. swi/snf mutants show drastically reduced expression of cell wall stress-responsive genes and hypersensitivity to cell wall-interfering compounds. On stress, binding of RNA Pol II to the promoters of these genes depends on Rlm1, Slt2, and SWI/SNF. Rlm1 physically interacts with SWI/SNF to direct its association to target promoters. Finally, we observe nucleosome displacement at the CWI-responsive gene MLP1/KDX1, which relies on the SWI/SNF complex. Taken together, our results identify the SWI/SNF complex as a key element of the CWI MAPK pathway that mediates the chromatin remodeling necessary for adequate transcriptional response to cell wall stress.

Indexed as

Chromatin Assembly and DisassemblyStress, PhysiologicalCell WallChromosomal Proteins, Non-HistoneGene Expression Regulation, FungalMADS Domain ProteinsMitogen-Activated Protein KinasesMolecular Sequence DataNuclear ProteinsRNA-Binding ProteinsRNA Polymerase IISaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTranscriptional ActivationTranscription FactorsTranscription, GeneticChromosomal Proteins, Non-HistoneMADS Domain ProteinsMitogen-Activated Protein KinasesMLP1 protein, S cerevisiaeNuclear ProteinsRLM1 protein, S cerevisiaeRNA-Binding ProteinsRNA Polymerase IISaccharomyces cerevisiae ProteinsSLT2 protein, S cerevisiaeSWI1 protein, S cerevisiaeSWI-SNF-B chromatin-remodeling complexTranscription Factors

Identifiers

PMID22621902
PMCPMC3395667
OpenAlexW2133462461

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.