Evidence map›Paper›PMID 22617042›Full record

ArticleDiabetes2012

The Gly(972)Arg variant of human IRS1 gene is associated with variation in glomerular filtration rate likely through impaired insulin receptor signaling.

Farook Thameem, Sobha Puppala, Jennifer Schneider, Basant Bhandari, Rector Arya, Nedal H Arar, Tetyana L Vasylyeva, Vidya S Farook, Sharon Fowler, Laura Almasy and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Diabetes, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. The combined role of allelic variants ofDiabetology & metabolic syndrome · 2019
    Article
  6. Review
  7. Review
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. The IRS1 G972R polymorphism and glomerular filtration rate in patients with type 2 diabetes of European ancestry.Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association · 2013
    Article
  15. Review
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Farook ThameemDivision of Nephrology, The University of Texas Health Science Center, San Antonio, Texas, USA. thameem@uthscsa.edu
Sobha Puppala
Jennifer Schneider
Basant Bhandari
Rector Arya
Nedal H Arar
Tetyana L Vasylyeva
Vidya S Farook
Sharon Fowler
Laura Almasy
John Blangero
Ravindranath Duggirala
Hanna E Abboud
Texas Biomedical Research Institute · USThe University of Texas Health Science Center · USThe University of Texas Health Science Center at San Antonio · US

Funding

INSTITUTE FOR INTEGRATION OF MEDICINE & SCIENCE: A PARTNERSHIP TO IMPROVE HEALTHUL1RR025767 · NCRR · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI CLARK, ROBERT A · 2008 to 2011
$23.8M
Institute for Integration of Medicine & Science: A Partnership to Improve HealthUL1TR001120 · NCATS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI CLARK, ROBERT A, HARGREAVES, KENNETH M · 2013 to 2017
$16.5M
Institute for Integration of Medicine & Science: A Partnership to Improve HealthUL1TR000149 · NCATS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI CLARK, ROBERT A · 2012 to 2013
$6.8M
NIDDM SUSCEPTIBILITY GENES IN MEXICAN-AMERICANSR01DK047482 · NIDDK · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI LEHMAN, DONNA M · 1993 to 2010
$5.4M
GENETICS OF GALLBLADDER DISEASE IN MEXICAN AMERICANSR01DK053889 · NIDDK · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI DUGGIRALA, RAVINDRANATH · 1998 to 2011
$2.3M
Institute for Integration of Medicine & Science: A Partnership to Improve HealthKL2RR025766 · NCRR · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI CLARK, ROBERT A · 2008 to 2011
$1.7M
Institute for Integration of Medicine & Science: A Partnership to Improve HealthKL2TR000118 · NCATS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI CLARK, ROBERT A · 2012 to 2013
$757k
GENETIC EPIDEMIOLOGY OF NIDDM IN MEXICAN AMERICANSR01DK042273 · NIDDK · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI STERN, MICHAEL P · 1991 to 2000
$532k
NCATS NIH HHS KL2 TR000118NCATS NIH HHS UL1 TR000149NCATS NIH HHS UL1 TR001120NCRR NIH HHS KL2 RR025766NCRR NIH HHS UL1 RR025767NIDDK NIH HHS DK-42273NIDDK NIH HHS DK-47482NIDDK NIH HHS DK-53889NIDDK NIH HHS R01 DK047482NIDDK NIH HHS R01 DK053889
6 · The paper itself

Abstract

The objective of this study is to identify and characterize the genetic variants related to the glomerular filtration rate (GFR) linkage on 2q37. Of the positional candidate genes, we selected IRS1 and resequenced its 2-kb promoter region and exons for sequence variants in 32 subjects. A total of 11 single nucleotide polymorphisms (SNPs) were identified. To comprehensively cover the 59-kb-long intron-1, eight additional tagging SNPs were selected from the HapMap. All the 19 SNPs were genotyped by TaqMan Assay in the entire data set (N = 670; 39 families). Association analyses between the SNPs and GFR and type 2 diabetes-related traits were performed using the measured genotype approach. Of the SNPs examined for association, only the Gly(972)Arg variant of IRS1 exhibited a significant association with GFR (P = 0.0006) and serum triglycerides levels (P = 0.003), after accounting for trait-specific covariate effects. Carriers of Arg972 had significantly decreased GFR values. Gly(972)Arg contributed to 26% of the linkage signal on 2q. Expression of IRS1 mutant Arg972 in human mesangial cells significantly reduced the insulin-stimulated phosphorylation of IRS1 and Akt kinase. Taken together, the data provide the first evidence that genetic variation in IRS1 may influence variation in GFR probably through impaired insulin receptor signaling.

Indexed as

AdultDiabetes Mellitus, Type 2FemaleGenotypeGlomerular Filtration RateHumansInsulinInsulin Receptor Substrate ProteinsLinkage DisequilibriumMaleMexican AmericansMiddle AgedPhenotypePolymorphism, Single NucleotideProto-Oncogene Proteins c-aktReceptor, InsulinInsulinInsulin Receptor Substrate ProteinsIRS1 protein, humanProto-Oncogene Proteins c-aktReceptor, Insulin

Identifiers

PMID22617042
PMCPMC3425400
OpenAlexW2019192561

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.