Evidence map›Paper›PMID 22615883›Full record

ArticlePloS one2012

GABA-A channel subunit expression in human glioma correlates with tumor histology and clinical outcome.

Anja Smits, Zhe Jin, Tamador Elsir, Hugo Pedder, Monica Nistér, Irina Alafuzoff, Anna Dimberg, Per-Henrik Edqvist, Fredrik Pontén, Eleonora Aronica and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
1.4field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 72 citations in OpenAlex.

  1. Article
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  5. Observational
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  9. Phytochemical combinations of lichenFrontiers in pharmacology · 2025
    Article
  10. Article
  11. Review
  12. Article
  13. Gene Expression of GABABrain sciences · 2024
    Article
  14. Article
  15. Review
  16. Review
  17. Review
  18. Article
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Anja SmitsDepartment of Neuroscience, Neurology, Uppsala University, Uppsala, Sweden. anja.smits@neuro.uu.se
Zhe Jin
Tamador Elsir
Hugo Pedder
Monica Nistér
Irina Alafuzoff
Anna Dimberg
Per-Henrik Edqvist
Fredrik Pontén
Eleonora Aronica
Bryndis Birnir
Uppsala University · SEAcademic Medical Center · NLKarolinska Institutet · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

GABA (γ-aminobutyric acid) is the main inhibitory neurotransmitter in the CNS and is present in high concentrations in presynaptic terminals of neuronal cells. More recently, GABA has been ascribed a more widespread role in the control of cell proliferation during development where low concentrations of extrasynaptic GABA induce a tonic activation of GABA receptors. The GABA-A receptor consists of a ligand-gated chloride channel, formed by five subunits that are selected from 19 different subunit isoforms. The functional and pharmacological properties of the GABA-A channels are dictated by their subunit composition. Here we used qRT-PCR to compare mRNA levels of all 19 GABA-A channel subunits in samples of human glioma (n = 29) and peri-tumoral tissue (n = 5). All subunits except the ρ1 and ρ3 subunit were consistently detected. Lowest mRNA levels were found in glioblastoma compared to gliomas of lower malignancy, except for the θ subunit. The expression and cellular distribution of the α1, γ1, ρ2 and θ subunit proteins was investigated by immunohistochemistry on tissue microarrays containing 87 gliomas grade II. We found a strong co-expression of ρ2 and θ subunits in both astrocytomas (r = 0.86, p<0.0001) and oligodendroglial tumors (r = 0.66, p<0.0001). Kaplan-Meier analysis and Cox proportional hazards modeling to estimate the impact of GABA-A channel subunit expression on survival identified the ρ2 subunit (p = 0.043) but not the θ subunit (p = 0.64) as an independent predictor of improved survival in astrocytomas, together with established prognostic factors. Our data give support for the presence of distinct GABA-A channel subtypes in gliomas and provide the first link between specific composition of the A-channel and patient survival.

Indexed as

AdultBrain NeoplasmsChloride ChannelsFemalegamma-Aminobutyric AcidGliomaHumansKaplan-Meier EstimateMaleNeoplasm StagingPrognosisProtein IsoformsProtein SubunitsReceptors, GABARetrospective StudiesRNA, MessengerChloride Channelsgamma-Aminobutyric AcidProtein IsoformsProtein SubunitsReceptors, GABARNA, Messenger

Identifiers

PMID22615883
PMCPMC3355166
OpenAlexW2106952286

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.