Evidence map›Paper›PMID 22615568›Full record

ArticlePLoS pathogens2012

Induction of GADD34 is necessary for dsRNA-dependent interferon-β production and participates in the control of Chikungunya virus infection.

Giovanna Clavarino, Nuno Cláudio, Thérèse Couderc, Alexandre Dalet, Delphine Judith, Voahirana Camosseto, Enrico K Schmidt, Till Wenger, Marc Lecuit, Evelina Gatti and 1 more

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02455089 (Prognosis Assessment of the Increase of GADD34 Gene Expression for Patient Suffering From Systemic Lupus Erythematosus), which is not on this map. Cited by 70 papers.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02455089 nacompletednot on this mapstarted 2015, after this paper: background citation

Prognosis Assessment of the Increase of GADD34 Gene Expression for Patient Suffering From Systemic Lupus Erythematosus

TypeinterventionalSponsorUniversity Hospital, GrenobleRan2015 to 2019Enrolled143ConditionsLupus ErythematosusArmsGADD34 RNA level measurement.
3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 120 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. SARS-CoV-2 and the DNA damage response.The Journal of general virology · 2023
    Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. GADD34 Ablation Exacerbates Retinal Degeneration in P23H RHO Mice.International journal of molecular sciences · 2022
    Article
  17. Article
  18. dsRNA-induced condensation of antiviral proteins modulates PKR activity.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  19. Review
  20. Article

10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Giovanna ClavarinoCentre d'Immunologie de Marseille-Luminy, UM2, Aix-Marseille Université, Marseille, France.
Nuno Cláudio
Thérèse Couderc
Alexandre Dalet
Delphine Judith
Voahirana Camosseto
Enrico K Schmidt
Till Wenger
Marc Lecuit
Evelina Gatti
Philippe Pierre
Centre d’Immunologie de Marseille-Luminy · FRCentre National de la Recherche Scientifique · FRInserm · FRInstitut Pasteur · FRAix-Marseille Université · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nucleic acid sensing by cells is a key feature of antiviral responses, which generally result in type-I Interferon production and tissue protection. However, detection of double-stranded RNAs in virus-infected cells promotes two concomitant and apparently conflicting events. The dsRNA-dependent protein kinase (PKR) phosphorylates translation initiation factor 2-alpha (eIF2α) and inhibits protein synthesis, whereas cytosolic DExD/H box RNA helicases induce expression of type I-IFN and other cytokines. We demonstrate that the phosphatase-1 cofactor, growth arrest and DNA damage-inducible protein 34 (GADD34/Ppp1r15a), an important component of the unfolded protein response (UPR), is absolutely required for type I-IFN and IL-6 production by mouse embryonic fibroblasts (MEFs) in response to dsRNA. GADD34 expression in MEFs is dependent on PKR activation, linking cytosolic microbial sensing with the ATF4 branch of the UPR. The importance of this link for anti-viral immunity is underlined by the extreme susceptibility of GADD34-deficient fibroblasts and neonate mice to Chikungunya virus infection.

Indexed as

3T3 CellsActivating Transcription Factor 4Alphavirus InfectionsAnimalsCell LineChikungunya FeverChikungunya viruseIF-2 KinaseFibroblastsInterferon-betaInterferon Type IInterleukin-6MicePoly I-CProtein Phosphatase 1RNA, Double-StrandedActivating Transcription Factor 4Atf4 protein, mouseeIF-2 KinaseInterferon-betaInterferon Type IInterleukin-6Poly I-CPpp1r15a protein, mouseProtein Phosphatase 1RNA, Double-StrandedThapsigargin

Identifiers

PMID22615568
PMCPMC3355096
OpenAlexW2064602529

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.