Evidence map›Paper›PMID 22615319›Full record

ArticleThe Journal of infectious diseases2012

Molecular characterization of the 2011 Hong Kong scarlet fever outbreak.

Herman Tse, Jessie Y J Bao, Mark R Davies, Peter Maamary, Hoi-Wah Tsoi, Amy H Y Tong, Tom C C Ho, Chi-Ho Lin, Christine M Gillen, Timothy C Barnett and 15 more

Abstract read
In one paragraph

Article in The Journal of infectious diseases, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
9.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 111 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Ongoing epidemic of scarlet fever in Shanghai and the emergence of M1The Lancet regional health. Western Pacific · 2025
    Article
  7. Article
  8. The burden of group AiScience · 2025
    Review
  9. Article
  10. Article
  11. Article
  12. Molecular characterization ofMicrobial genomics · 2024
    Article
  13. Article
  14. Review
  15. Detection of Streptococcus pyogenes M1Nature communications · 2023
    Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Cryptic prophages within aMicrobial genomics · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 6 institutions in 4 countries.

Herman TseDepartment of Microbiology, The University of Hong Kong, Hong Kong Special Administrative Region, China. htse@hkucc.hku.hk
Jessie Y J Bao
Mark R Davies
Peter Maamary
Hoi-Wah Tsoi
Amy H Y Tong
Tom C C Ho
Chi-Ho Lin
Christine M Gillen
Timothy C Barnett
Jonathan H K Chen
Mianne Lee
Wing-Cheong Yam
Chi-Kin Wong
Cheryl-Lynn Y Ong
Yee-Wai Chan
Cheng-Wei Wu
Tony Ng
Wilina W L Lim
Thomas H F Tsang
Cindy W S Tse
Gordon Dougan
Mark J Walker
Si Lok
Kwok-Yung Yuen
University of Hong Kong · HKUniversity of Queensland · AUPublic Health LaboratoryWellcome Sanger Institute · GBHKU-Pasteur Research Pole · HKHospital Authority · CN

Funding

Wellcome Trust
6 · The paper itself

Abstract

A scarlet fever outbreak occurred in Hong Kong in 2011. The majority of cases resulted in the isolation of Streptococcus pyogenes emm12 with multiple antibiotic resistances. Phylogenetic analysis of 22 emm12 scarlet fever outbreak isolates, 7 temporally and geographically matched emm12 non-scarlet fever isolates, and 18 emm12 strains isolated during 2005-2010 indicated the outbreak was multiclonal. Genome sequencing of 2 nonclonal scarlet fever isolates (HKU16 and HKU30), coupled with diagnostic polymerase chain reaction assays, identified 2 mobile genetic elements distributed across the major lineages: a 64.9-kb integrative and conjugative element encoding tetracycline and macrolide resistance and a 46.4-kb prophage encoding superantigens SSA and SpeC and the DNase Spd1. Phenotypic comparison of HKU16 and HKU30 with the S. pyogenes M1T1 strain 5448 revealed that HKU16 displays increased adherence to HEp-2 human epithelial cells, whereas HKU16, HKU30, and 5448 exhibit equivalent resistance to neutrophils and virulence in a humanized plasminogen murine model. However, in contrast to M1T1, the virulence of HKU16 and HKU30 was not associated with covRS mutation. The multiclonal nature of the emm12 scarlet fever isolates suggests that factors such as mobile genetic elements, environmental factors, and host immune status may have contributed to the 2011 scarlet fever outbreak.

Indexed as

Disease OutbreaksAdolescentAdultBacterial ProteinsChildChild, PreschoolFemaleGene Expression ProfilingGene Expression Regulation, BacterialGenome, BacterialGenomicsHong KongHumansInfantInterspersed Repetitive SequencesMaleBacterial Proteins

Identifiers

PMID22615319
PMCPMC4125623
OpenAlexW2126592876

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.