Evidence map›Paper›PMID 22613717›Full record

ArticleThe Journal of biological chemistry2012

Heterozygous carriage of a dysfunctional Toll-like receptor 9 allele affects CpG oligonucleotide responses in B cells.

Jelena Knezević, Dinko Pavlinić, William A Rose, Cynthia A Leifer, Kreso Bendelja, Jelka Gabrilovac, Marijo Parcina, Gordan Lauc, Andriy V Kubarenko, Branka Petricevic and 6 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 7 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 10 institutions in 4 countries.

Jelena KnezevićLaboratories of Molecular Oncology, Division of Molecular Medicine, Ruðer Bosković Institute, 10000 Zagreb, Croatia. jknezev@irb.hr
Dinko Pavlinić
William A Rose
Cynthia A Leifer
Kreso Bendelja
Jelka Gabrilovac
Marijo Parcina
Gordan Lauc
Andriy V Kubarenko
Branka Petricevic
Damir Vrbanec
Ljiljana Bulat-Kardum
Isabelle Bekeredjian-Ding
Jasminka Pavelić
Zlatko Dembić
Alexander N R Weber
Heidelberg University · DEInstitute of Medical Microbiology and Hygiene · DENew York State College of Veterinary Medicine · USRudjer Boskovic Institute · HRUniversity Hospital Centre Zagreb · HRUniversity of Oslo · NOAgricultural Institute Osijek · HRInstitute of Immunology · HRUniversity of Rijeka · HRUniversity of Zagreb · HR

Funding

Toll-like receptor 9: trafficking and signalingR01AI076588 · NIAID · CORNELL UNIVERSITY · PI LEIFER, CYNTHIA A · 2009 to 2013
$1.8M
NIAID NIH HHS R01 AI076588
6 · The paper itself

Abstract

Toll-like receptors (TLR) are employed by the innate immune system to detect microbial pathogens based on conserved microbial pathogen molecules. For example, TLR9 is a receptor for CpG-containing microbial DNA, and its activation results in the production of cytokines and type I interferons from human B cells and plasmacytoid dendritic cells, respectively. Both are required for mounting an efficient antibacterial or antiviral immune response. These effects are mimicked by synthetic CpG oligodeoxynucleotides (ODN). Although several hyporesponsive TLR9 variants have been reported, their functional relevance in human primary cells has not been addressed. Here we report a novel TLR9 allele, R892W, which is hyporesponsive to CpG ODN and acts as a dominant-negative in a cellular model system. The R892W variant is characterized by increased MyD88 binding and defective co-localization with CpG ODN. Whereas primary plasmacytoid dendritic cells isolated from a heterozygous R892W carrier responded normally to CpG by interferon-α production, carrier B cells showed impaired IL-6 and IL-10 production. This suggests that heterozygous carriage of a hyporesponsive TLR9 allele is not associated with complete loss of TLR9 function but that TLR9 signals elicited in different cell types are regulated differently in human primary cells.

Indexed as

AllelesB-LymphocytesCell LineEnzyme-Linked Immunosorbent AssayFlow CytometryGenotypeHumansImmunoblottingImmunoprecipitationMutagenesisMyeloid Differentiation Factor 88NF-kappa BOligodeoxyribonucleotidesPolymerase Chain ReactionProtein BindingProtein Structure, SecondaryCPG-oligonucleotideMYD88 protein, humanMyeloid Differentiation Factor 88NF-kappa BOligodeoxyribonucleotidesToll-Like Receptor 9

Identifiers

PMID22613717
PMCPMC3397879
OpenAlexW2146748536

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.