Evidence map›Paper›PMID 22612060›Full record

ArticleBiochemistry2012

Conformational properties of nine purified cystathionine β-synthase mutants.

Aleš Hnízda, Tomas Majtan, Lu Liu, Angel L Pey, John F Carpenter, Milan Kodíček, Viktor Kožich, Jan P Kraus

Erratum issuedAbstract read
In one paragraph

Article in Biochemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
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  4. Review
  5. Article
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  9. Article
  10. Structural basis of regulation and oligomerization of human cystathionine β-synthase, the central enzyme of transsulfuration.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 4 countries.

Aleš HnízdaCharles University, Prague, Czech Republic.
Tomas Majtan
Lu Liu
Angel L Pey
John F Carpenter
Milan Kodíček
Viktor Kožich
Jan P Kraus
University of Colorado Denver · USCharles University · CZGeneral University Hospital in Prague · CZSlovak Academy of Sciences · SKUniversidad de Granada · ESUniversity of Chemistry and Technology, Prague · CZ

Funding

HOMOCYSTEINE, NITRIC OXIDE AND HEME: ROLE IN THROMBOSISR01HL065217 · NHLBI · UNIVERSITY OF WISCONSIN MADISON · PI BURSTYN, JUDITH N, KRAUS, JAN P. · 2000 to 2012
$3.1M
NHLBI NIH HHS HL065217NHLBI NIH HHS R01 HL065217
6 · The paper itself

Abstract

Protein misfolding due to missense mutations is a common pathogenic mechanism in cystathionine β-synthase (CBS) deficiency. In our previous studies, we successfully expressed, purified, and characterized nine CBS mutant enzymes containing the following patient mutations: P49L, P78R, A114V, R125Q, E176K, R266K, P422L, I435T, and S466L. These purified mutants exhibited full heme saturation, normal tetrameric assembly, and high catalytic activity. In this work, we used several spectroscopic and proteolytic techniques to provide a more thorough insight into the conformation of these mutant enzymes. Far-UV circular dichroism, fluorescence, and second-derivative UV spectroscopy revealed that the spatial arrangement of these CBS mutants is similar to that of the wild type, although the microenvironment of the chromophores may be slightly altered. Using proteolysis with thermolysin under native conditions, we found that the majority of the studied mutants is more susceptible to cleavage, suggesting their increased local flexibility or propensity for local unfolding. Interestingly, the presence of the CBS allosteric activator, S-adenosylmethionine (AdoMet), increased the rate of cleavage of the wild type and the AdoMet-responsive mutants, while the proteolytic rate of the AdoMet-unresponsive mutants was not significantly changed. Pulse proteolysis analysis suggested that the protein structure of the R125Q and E176K mutants is significantly less stable than that of the wild type and the other mutants. Taken together, the proteolytic data shows that the conformation of the pathogenic mutants is altered despite retained catalytic activity and normal tetrameric assembly. This study demonstrates that the proteolytic techniques are useful tools for the assessment of the biochemical penalty of missense mutations in CBS.

Indexed as

Protein FoldingCircular DichroismCystathionine beta-SynthaseEscherichia coliHumansModels, MolecularMutation, MissenseProtein ConformationProteolysisS-AdenosylmethionineSpectrophotometry, UltravioletCystathionine beta-SynthaseS-Adenosylmethionine

Identifiers

PMID22612060
PMCPMC3384745
OpenAlexW2055416108

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.