Evidence map›Paper›PMID 22611319›Full record

ArticleWorld journal of gastroenterology2012

Antibiotic resistance and cagA gene correlation: a looming crisis of Helicobacter pylori.

Adnan Khan, Amber Farooqui, Hamid Manzoor, Syed Shakeel Akhtar, Muhammad Saeed Quraishy, Shahana Urooj Kazmi

Open access · bronzeAbstract read
In one paragraph

Article in World journal of gastroenterology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 3 pooled it
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 3 syntheses or guidelines pooled it, 34 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
  5. Research Status and Prospects ofGastroenterology research and practice · 2026
    Review
  6. Review
  7. Article
  8. Article
  9. High Prevalence of Antibiotic Resistance in IranianJournal of clinical medicine · 2019
    Article
  10. Article
  11. Can bacterial virulence factors predict antibiotic resistantWorld journal of gastroenterology · 2018
    Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. The effect of virulence genotypes ofSaudi journal of gastroenterology : official journal of the Saudi Gastroenterology Association
    Article
  20. Primary antibiotic resistance and its relationship with cagA and vacA genes in Helicobacter pylori isolates from Algerian patients.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Adnan KhanImmunology and Infectious Diseases Research Laboratory, Department of Microbiology, University of Karachi, University Road, Karachi 75270, Pakistan. adnankh@uok.edu.pk
Amber Farooqui
Hamid Manzoor
Syed Shakeel Akhtar
Muhammad Saeed Quraishy
Shahana Urooj Kazmi
University of Karachi · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimTo determine antibiotic resistance of Helicobacter pylori (H. pylori) in Pakistan and its correlation with host and pathogen associated factors.

methodsA total of 178 strains of H. pylori were isolated from gastric biopsies of dyspeptic patients. Susceptibility patterns against first and second-line antibiotics were determined and trends of resistance were analyzed in relation to the sampling period, gastric conditions and cagA gene carriage. The effect of cagA gene on the acquisition of resistance was investigated by mutant selection assay.

resultsThe observations showed that monoresistant strains were prevalent with rates of 89% for metronidazole, 36% for clarithromycin, 37% for amoxicillin, 18.5% for ofloxacin and 12% for tetracycline. Furthermore, clarithromycin resistance was on the rise from 2005 to 2008 (32% vs 38%, P = 0.004) and it is significantly observed in non ulcerative dyspeptic patients compared to gastritis, gastric ulcer and duodenal ulcer cases (53% vs 20%, 18% and 19%, P = 0.000). On the contrary, metronidazole and ofloxacin resistance were more common in gastritis and gastric ulcer cases. Distribution analysis and frequencies of resistant mutants in vitro correlated with the absence of cagA gene with metronidazole and ofloxacin resistance.

conclusionThe study confirms the alarming levels of antibiotic resistance associated with the degree of gastric inflammation and cagA gene carriage in H. pylori strains.

Indexed as

Anti-Bacterial AgentsAntigens, BacterialBacterial ProteinsBiopsyChi-Square DistributionDNA Mutational AnalysisDrug Resistance, Multiple, BacterialHelicobacter InfectionsHelicobacter pyloriHumansLinear ModelsMicrobial Sensitivity TestsMutationPakistanStomachAnti-Bacterial AgentsAntigens, BacterialBacterial ProteinscagA protein, Helicobacter pyloriAntibiotic resistancecagAClarithromycinFluoroquinolonesHelicobacter pyloriMetronidazolePakistan

Identifiers

PMID22611319
PMCPMC3351776
OpenAlexW2067649345

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.