Evidence map›Paper›PMID 22610349›Full record

ArticleAmerican journal of physiology. Lung cellular and molecular physiology2012

Molecular mechanisms of MMP9 overexpression and its role in emphysema pathogenesis of Smad3-deficient mice.

Bing Xu, Hui Chen, Wei Xu, Wenming Zhang, Sue Buckley, Song Guo Zheng, David Warburton, Martin Kolb, Jack Gauldie, Wei Shi

Open access · greenAbstract read
In one paragraph

Article in American journal of physiology. Lung cellular and molecular physiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 38 citations in OpenAlex.

  1. Review
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  6. Association of theArchives of medical science : AMS · 2024
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  8. Genetic Deletion ofInternational journal of molecular sciences · 2022
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  10. Integrating multiomics longitudinal data to reconstruct networks underlying lung development.American journal of physiology. Lung cellular and molecular physiology · 2019
    Article
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  14. Review
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  17. Defining COPD-Related Comorbidities, 2004-2014.Chronic obstructive pulmonary diseases (Miami, Fla.) · 2014
    Review
  18. Article
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  20. The Roles of SIRT1 in Cancer.Genes & cancer · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Bing XuDevelopmental Biology and Regenerative Medicine Program, Children's Hospital Los Angeles, CA 90027, USA.
Hui Chen
Wei Xu
Wenming Zhang
Sue Buckley
Song Guo Zheng
David Warburton
Martin Kolb
Jack Gauldie
Wei Shi
Children's Hospital of Los Angeles · USUniversity of Southern California · USMcMaster University · CASouthern California University for Professional Studies · US

Funding

Molecular Mechanisms of Lung Branching MorphogenesisR01HL068597 · NHLBI · CHILDREN'S HOSPITAL OF LOS ANGELES · PI SHI, WEI · 2002 to 2015
$4.7M
Mechanistic mixture models of mechanics of morphogenesis with murine measurementR01GM096195 · NIGMS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI LUBKIN, SHARON R · 2010 to 2013
$1.4M
Development of a novel genetic approach to study lung mesenchymal cell signalingR21HL109932 · NHLBI · CHILDREN'S HOSPITAL OF LOS ANGELES · PI SHI, WEI · 2011 to 2012
$440k
NHLBI NIH HHS HL068597NHLBI NIH HHS HL109932NHLBI NIH HHS R01 HL068597NHLBI NIH HHS R21 HL109932NIGMS NIH HHS R01 GM096195
6 · The paper itself

Abstract

Previous studies have found that inappropriate elevation of matrix metalloproteinase-9 (MMP9) expression and activity is coincident with early onset of emphysema in Smad3-null mice. Herein, we further investigated the role of increased MMP9 in emphysema pathogenesis and the related molecular regulatory mechanisms of elevated MMP9 in Smad3-null lung. Genetic blockade of MMP9 in Smad3-null mice significantly attenuated emphysema pathology but not hypoalveolarization during early postnatal lung development. Furthermore, Smad3 was found to be a transcription factor to positively regulate a protein deacetylase sirtuin 1 (SIRT1) by binding to an AP-1 site of SIRT1 promoter. A synergistic regulatory effect on SIRT1 expression was also detected between Smad3 and c-Jun. Consistently, Smad3 knockout lung at P28 had reduced SIRT1 expression, which in turn resulted in increased acetylation of histone H3 at the transcription factor activator protein 1 (AP-1), NF-κB, and Pea3 binding sites of MMP9 promoter and increased acetylation of NF-κB. In addition, increased Pea3 expression and nuclear accumulation was also detected in Smad3-null lungs at P28. Consistently, bindings of acetylated NF-κB and Pea3 to the MMP9 promoter were elevated in Smad3-null lung. We thus propose that deficiency of Smad3 causes downregulation of SIRT1 and increased Pea3 expression/nuclear accumulation, respectively. Decreased SIRT1 activity resulted in increased acetylation of histone H3 and NF-κB. Subsequently, increased bindings of transcription factors including NF-κB and Pea3 to MMP9 promoter significantly upregulate MMP9 transcription, contributing to emphysema pathogenesis.

Indexed as

AcetylationAnimalsBase SequenceBinding SitesCell LineGene ExpressionGene Expression Regulation, EnzymologicHistonesJNK Mitogen-Activated Protein KinasesLungMatrix Metalloproteinase 9MiceMice, Inbred C57BLMice, KnockoutMolecular Sequence DataNF-kappa BHistonesJNK Mitogen-Activated Protein KinasesMatrix Metalloproteinase 9Mmp9 protein, mouseNF-kappa BSirt1 protein, mouseSirtuin 1Smad3 ProteinSmad3 protein, mouseTranscription Factor AP-1transcription factor PEA3Transcription FactorsTransforming Growth Factor beta1

Identifiers

PMID22610349
PMCPMC3404628
OpenAlexW2124272888

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.